| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1200 |
|---|
| Symbol | |
|---|
| ID | 5703984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1351343 |
|---|
| End bp | 1351984 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641270718 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_001536099 |
|---|
| Protein GI | 159036846 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.167613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTGACG AGCAGACCGA CAAGTCCCGC AACTCCTTCT GGAAGGAGCT GCCGATCCTC
CTGGGCGTGG CGATTCTGGT CGCGGTGCTG GTACGCGCCT TCGTGCTGCA GACCTTTTTC
ATTCCTTCGC CGTCGATGGA AAACACCCTG CAGATCGACG ATCGGGTGCT GGTCAACAAG
CTGGTGTACG ACTTCCGTTC GCCGGAGCGC GGCGAGGTGA TCGTTTTCAA GGCGCCTACT
TCGTGGAGCG GCAATCCGGA CGGTGAGGAC TTCATCAAGC GGGTCATCGG CGTCGGCGGG
GACCACCTGG TCTGCTGCGA CGAGCAGGGC CGGATCACGA TCAACGGGGT CGCACTGGAC
GAGCCGTACC TGTTCTCCTT CCGTGGCGAG CGGGACCAGC CCGCCGATCA GGACTTCGAT
GTGACCGTCC CACGGGGGCG ACTGTGGGTG ATGGGCGACC ACCGGTCGGC CTCGGGTGAC
TCGTTGCAGC ACTGGCAGCA GTCGGGGCAG GACGTCACCG TGGCGACCAT CCCCGAGGAC
CGCGTCGTCG GCCGTGCCTT CACCATCTTC TGGCCCCTCA ACCGGGCGCG GTGGCTGAGT
GTGCCCGAGC AGTACGGCCC CATTCCGCAG CCCGGAAGCT GA
|
|---|
| Protein sequence | MIDEQTDKSR NSFWKELPIL LGVAILVAVL VRAFVLQTFF IPSPSMENTL QIDDRVLVNK
LVYDFRSPER GEVIVFKAPT SWSGNPDGED FIKRVIGVGG DHLVCCDEQG RITINGVALD
EPYLFSFRGE RDQPADQDFD VTVPRGRLWV MGDHRSASGD SLQHWQQSGQ DVTVATIPED
RVVGRAFTIF WPLNRARWLS VPEQYGPIPQ PGS
|
|---|
| |