| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1196 |
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| Symbol | rimM |
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| ID | 5704102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1348365 |
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| End bp | 1348907 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641270714 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001536095 |
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| Protein GI | 159036842 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.934668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGTCG TCGGCAGGAT CGGCAAACCG CACGGGATCC GCGGTGAGGT GACCGTGGAG
GTGCGGACCG ACGAGCCTGA GACACGCTTC GCCCCGGGCT CGGTGCTGCG CACCGAGCCC
GGGGCGAACG TGCCCGCCAG TCCCGGGGCT TACCGAGTGC CGAGCGAGTT GACCGTCGAG
ACGGCCCGTT GGCACCAGGG GCGGCTGCTG CTGGTGGCGT TCGAGGGTGT GCTCGACCGG
AACGTCGCCG AGGCGCTACG CGGAACTTTC GTCGGGGTGG ACCGCGCCGA CGTCACCGCG
CCGACGGACC CGGAGGAGTT CCACGACCAC CAGCTGGTCG GCCTGGCCGT GGTCACCTCG
GCCGGGGAAC GGCTGGGCGA GATCGTCCGG ATCGACCACG CACCCGCCGC GGACCTGCTG
GTGCTGCGCC GCCCCGGCGA CCGGGACGTG CTGATTCCGT TTGTCCGCGC GATCGTTCCC
GAGGTCGACC TCGCCGGCGG TCGCGTCGTC GTGGACCCGC CTGGCGGCCT GCTCGACCTC
TGA
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| Protein sequence | MLVVGRIGKP HGIRGEVTVE VRTDEPETRF APGSVLRTEP GANVPASPGA YRVPSELTVE
TARWHQGRLL LVAFEGVLDR NVAEALRGTF VGVDRADVTA PTDPEEFHDH QLVGLAVVTS
AGERLGEIVR IDHAPAADLL VLRRPGDRDV LIPFVRAIVP EVDLAGGRVV VDPPGGLLDL
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