Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1184 |
Symbol | |
ID | 5703535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1333826 |
End bp | 1335598 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641270702 |
Product | hypothetical protein |
Protein accession | YP_001536083 |
Protein GI | 159036830 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.794398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00359059 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCGCCG CACACCTGCT CGTCGGCCCG CTGCTCCGAC GGGTGGTCGG CACGCAGGCC ACCATCTGGG TCGAGACGAG CGCACCCGCG GTGGTCACCG TCCGTACGGC CGACGGCGCC ACCGGCACTG CGGCCACCTT CTCCGCCTAC CAGCACCACT ACGCCCTGGT CGTGGTCTCC GGACTGGTCC CGGGCACCGC CAGCACCTAC GAGGTGCTGC TCGACGGCGA ACCCGTCTGG CCACAGCGGG GCCCCTACCA GCCCAGTGTC ATCCGCACCC GGGCGGCCGA CGACCGCGAC CAGCCGGTGC ACCTGGCCTT CGGCTCGTGC CGGGAAACCA CCCAGCGGGC CACCGCACGC CGACTGCCCC CGGACGCGCT CGACGCCTAC GCGCGGCGGC TGGCCGCCGA CTTCGACCCG GCGGACCTGC CCGACCTGCT GGTACTCCTC GGCGACCAGG TGTACGCCGA CGAGACCTCA CCGACCGTAC GACGCCTGCT GAGACGGCGA CGCCAGCGGC CGGCCGGCGC ACCGGTCGAC CAGGTGGTGA GCTTCGACGA GTACACCAAG CTCTACCTGG AGTCGTGGGG CGACCCGGAG ATCCGCTGGC TGCTCTCCAC CGTACCGACG GTAATGATCT TCGACGACCA CGAGATCGTC GACGACTGGA ACACCTCCGC GGCCTGGCGC GCCGACGCCC GCGCCCAGCC CTGGTGGGCC GAGCGCATCG GCAGCGGCCT GGCCTCCTAC TGGGTCTACC AGCACCTCGG CAACCTCTCC CCGGAGGAGA TCGCGGTGGA CCCGGTCCAC ACGAAGGTGA CCACCGCCGA GGACGCCACC GAGGTACTGC GCGAGTTCGG TCGCCAGGTC GACCGGGAGT CCGACCTCGC CCACGACCCC GAACGGTGGC GGGCGGTGCA GTACCAGTGG AGCTTCGCGC TCGACATCGG CCGGACCCGC CTGGTCATGC TCGACAACCG GTGCAGCCGG GTGCTGGCGT CGGGCCAGCG GGCGATACTG CCGCCGGGTG AGTGGTCCTG GCTCGTCGAC CAGGCCCACG GCACGTACGA CCACCTGGTC GTGGGCTGTT CCCTGCCGTG GCTGCTCCCG CCCAGCATCC ACCACGTGGA GGCGTGGAAC GAGAAACTCG CCGACTCCCC CCGACGCTGG GTGGCCGACG CGGCGGAGAA GCTACGCCGC GCTCTCGACC TCGAGCACTG GGCGGCGTTC CGTCGCTCGT TCGACGCACT CGGTGCGCTG TTCGCCCGCA TCGGCGGCGG CACGCCGGAC GAACCCGGGC GGCACCCGGA CACCGGCCCG ACGTCCGCGG CCCCGGCGTC GATCAGTGTC CTCGGTGGAG ACGTGCACCA CTCGTACGTG GCCCGGGCTC GGTTCGCCGA CTCATCGGTG GTCACCCCGG TGCACCAGCT CACCTGCTCG CCCATCCACA ACCAGGTGCC GGCCGGGATG CGTCCGATGA TGCGGCTGGG CTGGTCACCG GGCCTGGCCG TGGCCGCCCG GGCGCTGGCG CGCACAGCCG GCGTCCGCCG GCCGTCGCTG ACGTGGACGA AGCTGGCCGG CCCGTACTTC GGCAACGCCA TCGGCACACT GCGCCACGAC GGGCGTCGGG CCGAGGTAAC GATCGAGGGC ACCACCAGTG CCGGTGCGCT GCACCGGGTG ATGCGCCACG ACCTCGCCGG CGGCCCAACG GCAACCCCGG CCAACGCCGA GCCCGGTGCC TGGGCTCGGC CATCTGCGCC CCGCGCTCGC TAG
|
Protein sequence | MPAAHLLVGP LLRRVVGTQA TIWVETSAPA VVTVRTADGA TGTAATFSAY QHHYALVVVS GLVPGTASTY EVLLDGEPVW PQRGPYQPSV IRTRAADDRD QPVHLAFGSC RETTQRATAR RLPPDALDAY ARRLAADFDP ADLPDLLVLL GDQVYADETS PTVRRLLRRR RQRPAGAPVD QVVSFDEYTK LYLESWGDPE IRWLLSTVPT VMIFDDHEIV DDWNTSAAWR ADARAQPWWA ERIGSGLASY WVYQHLGNLS PEEIAVDPVH TKVTTAEDAT EVLREFGRQV DRESDLAHDP ERWRAVQYQW SFALDIGRTR LVMLDNRCSR VLASGQRAIL PPGEWSWLVD QAHGTYDHLV VGCSLPWLLP PSIHHVEAWN EKLADSPRRW VADAAEKLRR ALDLEHWAAF RRSFDALGAL FARIGGGTPD EPGRHPDTGP TSAAPASISV LGGDVHHSYV ARARFADSSV VTPVHQLTCS PIHNQVPAGM RPMMRLGWSP GLAVAARALA RTAGVRRPSL TWTKLAGPYF GNAIGTLRHD GRRAEVTIEG TTSAGALHRV MRHDLAGGPT ATPANAEPGA WARPSAPRAR
|
| |