Gene Sare_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1174 
Symbol 
ID5704266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1323082 
End bp1323645 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content70% 
IMG OID641270692 
Producthypothetical protein 
Protein accessionYP_001536073 
Protein GI159036820 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000602797 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCAAGC ACACGCCTGC GCCACTCGAC CCCAGGTCGC CGCTGGTCCT CGACACGAGA 
GACCTGCCGC GTCGGCCTGG TGCGTTGCGT ACGGTCAGGC GGGTAGCCGC GGCGCCGGCG
GACCTCGGCG TGGAGTTGAT CGGCGTGCCG ACGGGCGCGG ATCTCGACCT CGACCTGAGG
TTGGAGTCGG TTTCCGAGGG GGTGCTCGTC TCCGGGACCA TCAGCGGTCC CATCAGGGGC
GAGTGCAGCC GCTGTCTGCG CGACATCGAC GACGTCGTGG CCGTGCCGGT CCAGGAGCTG
TACGCGTACG AGAACAGCAC CACGGACATG ACGGCCGACG AGGACGAGGT GGGCCGGATG
CAGGGCGATC TGATCGACCT GGAGCCGGCG CTGCGGGACG CGGTGGTGCT CACGCTGCCG
ACCAATCCGC TCTGCCGGGA GGACTGCCCA GGCTTGTGCC CCGACTGCGG GGTGCGCTGG
GACGAGCTGC CGGCCGATCA CAGCCACCAG CAGGTCGACC CGCGTTGGGC GGCCCTGTCG
CAACTGACCC GTAAAGAGGA GTAA
 
Protein sequence
MPKHTPAPLD PRSPLVLDTR DLPRRPGALR TVRRVAAAPA DLGVELIGVP TGADLDLDLR 
LESVSEGVLV SGTISGPIRG ECSRCLRDID DVVAVPVQEL YAYENSTTDM TADEDEVGRM
QGDLIDLEPA LRDAVVLTLP TNPLCREDCP GLCPDCGVRW DELPADHSHQ QVDPRWAALS
QLTRKEE