Gene Sare_1150 details

Gene Information

• Locus tag: Sare_1150
• Symbol: leuD
• ID: 5704414
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora arenicola CNS-205
• Kingdom: Bacteria
• Replicon accession: NC_009953
• Strand: +
• Start bp: 1300794
• End bp: 1301381
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641270668
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001536049
• Protein GI: 159036796
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 0
• Fosmid unclonability p-value: 0.0000000354633
• Fosmid Hitchhiker: No
• Fosmid clonability: unclonable

Sequence

Gene sequence

ATGGAGAAGT TCACCATCCA CACCGGCACT GCCGCGCCAT TGCGTCGTTC TAATGTGGAT 
ACCGATCAGA TCATTCCCGC CGTATATCTC AAACGAGTGA CGCGAACAGG ATTCGCGGAT 
GGCTTGTTCA GTGGGTGGCG GGAGGATCAG GGGTTCGTCC TCAACGATGA ATCGTATTCG 
GATGCGTCGA TCCTGGTTGC TGGTCCCGAG TTCGGCACCG GCTCGTCTCG GGAGCATGCC 
GTCTGGGCCT TGCGGGACTG GGGGTTCCGG GCCGTGCTCT CCCCGCGCTT CGGAGACATC 
TTCCGGGGCA ACGCGCTCAA GGGAGGGCTG CTGCCAGTTG AGTTGGAATT GGAAGCCATC 
GAAGAGATCT GGAACCGGGT CGAGGCCGAT CCGCGCACGC CGGTCACCGT CGACCTCGAC 
GCCCGCCAGG TCCGGGTCGG GGAGGCGACC TGGTCGTTCG CGCTGGACGA GTTCAGCCGC 
TGGCGGCTGA TGGAGGGCTT GGACGACATT GGACTCACCC TCCGACACGA GGTCGTGATC 
GGCGACTTCG AGGCGTCCCG GCCGCCGTTC CTCCCGACCG TCACATAG 

 

Protein sequence

MEKFTIHTGT AAPLRRSNVD TDQIIPAVYL KRVTRTGFAD GLFSGWREDQ GFVLNDESYS 
DASILVAGPE FGTGSSREHA VWALRDWGFR AVLSPRFGDI FRGNALKGGL LPVELELEAI 
EEIWNRVEAD PRTPVTVDLD ARQVRVGEAT WSFALDEFSR WRLMEGLDDI GLTLRHEVVI 
GDFEASRPPF LPTVT