| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1139 |
|---|
| Symbol | |
|---|
| ID | 5704283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1289903 |
|---|
| End bp | 1290310 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641270654 |
|---|
| Product | peptidyl-tRNA hydrolase domain protein |
|---|
| Protein accession | YP_001536038 |
|---|
| Protein GI | 159036785 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.668699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000255513 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCACGATC GGTGGGTGGT GCCCGACGCC GAGCTGCGGG AGCGCTTCTC CCGGTCGTCC
GGGCCCGGCG GTCAGGGGGT CAACACGACC GACTCGCGGG TGGAACTCAG CCTTGACCTG
GCCGCGTCAC CGTCGCTCCC GGAGCCGCTG CGCGCGCGGG CACTCGACCG CCTCGCCGGG
CGACTCGTCA ACGGCGTGCT GACCGTGACG GCCAGTGAGC ACCGGGCGCA ACTCGCCAAC
CGTGAGGCCG CCCGGGAGCG GATGGCCGCA CTGTTGCGGG AGGCGATCGC ACCGCCGCCG
AAGCGGCGTC GCCCGACCCG GCCCTCCCGT GCTGCCAAGG AGCGTCGACT GGCCGAGAAG
AAACGGCGGT CCCAGCGCAA GCGCGACCGC CGTGTCGACG GCGACTGA
|
|---|
| Protein sequence | MHDRWVVPDA ELRERFSRSS GPGGQGVNTT DSRVELSLDL AASPSLPEPL RARALDRLAG
RLVNGVLTVT ASEHRAQLAN REAARERMAA LLREAIAPPP KRRRPTRPSR AAKERRLAEK
KRRSQRKRDR RVDGD
|
|---|
| |