| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1133 |
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| Symbol | |
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| ID | 5703764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1283032 |
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| End bp | 1284615 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641270648 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001536032 |
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| Protein GI | 159036779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.740048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000205142 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTTCC AGGTATACGA CACGACCCTG CGCGACGGCG CCCAGCGTGA GGGGGTCAGC
TATTCGGTCG TCGACAAACT CGCGGTGGCC CGGCTTCTCG ACGAGTTCGG CGTCGGTTTC
ATCGAAGGAG GATGGCCGGG CGCAGTACCG AAGGACACCG AGTTCTTCCG TCGCGCGCGC
ACCGACCTCG ACCTGAACCA CGCGGTGCTG GTGGCCTTCG GCGCCACCCG TCGCGCCGGT
CTGGGCGTCG ACAACGACCC GCAGGTGCAC AGCCTGCTCG CCGCCGAGAC CCCCGTCGTC
ACGCTGGTCG CCAAGGCCGA CCTGCGGCAC GTGCAGCGGG CCCTGCGTAC CACCGCGGAC
GAGAACCTGG CGATGATCCA TGACACCGTG ACGTACCTGG TGGCCGAGGG CCGGCGGGTG
TTCGTTGACG GGGAGCACTT CTTCGACGGC TACCGTGACG ATCCCACGTA CACCTCGTCG
GTGGTCGAGG CCGCGCTCGC CGCCGGTGCG GAGCGGTTCG TGCTGTGCGA CACCAATGGT
GGCATGCTTC CGTCCCAGGT CACCGCCGTG ATCGCTGACC TCACCGCCCG ACTCGGCGTG
GCACCCGAGC AACTCGGCAT CCACGGCCAG GACGACACCG CCTGTGCCGT GGCGAACACC
ATCGCCGCGG TGGAGGCGGG CGTACGGCAC GTGCAGGGCA CCGCCAACGG GTACGGCGAG
CGACCCGGTA ACGCCGACCT CTTCGCGGTG GTGGCGAACC TTCAACTCAA GCTCGGGCTG
CCAGTCCTAC CAGCGGGCTG CCTGGAACGG ATGGTGCGGG TGTCCCGCGG CATCGCCGAC
ATCGCCAACA TCGCACCCGA CGACCACCAG GCGTACGTCG GTGCCGCGGC CTTCGCCCAC
AAGGCGGGGC TGCACGCGAG CGCGATCAAG GTGGATCCGT TGTTCTACAA CCATGTGGAC
CCGCAGGCGG TGGGAAACCA CATGCGCATT CTCGTCACCG AGATGGCCGG ACGGGCCAGC
ATCGAACTCA AGAGCCGCGA GCTGGGTCTC GCACTGGCCG ACCACCCGGA GGCCCTGAAC
CGGGTCACCA AGCGGGTCAA GGACCTGGAG GCCGCCGGCT GGTCGTTCGA GGCGGCGGAT
GCCTCCTTCG AACTTCTGGT CCGCTCCGAA CTGCCCGACG GGGCGCCGGC GCGACCGTTC
ACCCTCGAGT CCTACCGCAT CCTGGTCGAG CACCGGGAGG ACAACGCGGT GGTCTCCGAG
GCGACGGTAA AGATCCGGAT AGGCGGTGAG CGGATGATCG CCACCGCGGA GGGCAACGGC
CCGGTGAACG CGCTCGACGA GGCGTTACGC GTCGGCCTCG CCCGGCACTA TCCGGAGCTG
CGTGACTTCG AGTTGGCCGA CTACAAGGTG AGGATTCTGG AGGGCAGCCA CGGCACCGGG
GCGGTGACCA GGGTGCTGGT GGAGACGGCC GATGGGGCCG GCCGGGACTG GACCACGGTG
GGCGTGCATC CCAACGTGGT GGAGGCGAGT TGGGGCGCAC TGGTCGACGC CCTGACCTAC
GGGCTGGATC GGGCCCGGAC CTGA
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| Protein sequence | MTFQVYDTTL RDGAQREGVS YSVVDKLAVA RLLDEFGVGF IEGGWPGAVP KDTEFFRRAR
TDLDLNHAVL VAFGATRRAG LGVDNDPQVH SLLAAETPVV TLVAKADLRH VQRALRTTAD
ENLAMIHDTV TYLVAEGRRV FVDGEHFFDG YRDDPTYTSS VVEAALAAGA ERFVLCDTNG
GMLPSQVTAV IADLTARLGV APEQLGIHGQ DDTACAVANT IAAVEAGVRH VQGTANGYGE
RPGNADLFAV VANLQLKLGL PVLPAGCLER MVRVSRGIAD IANIAPDDHQ AYVGAAAFAH
KAGLHASAIK VDPLFYNHVD PQAVGNHMRI LVTEMAGRAS IELKSRELGL ALADHPEALN
RVTKRVKDLE AAGWSFEAAD ASFELLVRSE LPDGAPARPF TLESYRILVE HREDNAVVSE
ATVKIRIGGE RMIATAEGNG PVNALDEALR VGLARHYPEL RDFELADYKV RILEGSHGTG
AVTRVLVETA DGAGRDWTTV GVHPNVVEAS WGALVDALTY GLDRART
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