Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1131 |
Symbol | |
ID | 5703762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1281383 |
End bp | 1282165 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641270646 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_001536030 |
Protein GI | 159036777 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000123663 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACGGTGA CTTCGGCGGG CGACACCCAC CGGGCCGACC GCTACCGTGT CAGGGTGGAC GCCATTGAAG TCACCAGGTT CAACACTCTG TTCAACTTCC GCGACGTCGG CGGGCACGCC GGCCACGACG GACGCACCGT CCGTAGCGGA CGACTGTTCC GCTCGGACAC GCCACACCGC TTGGCCGGCG CCGACCGGAC GGCGTTCGCC TCGTTCGGCG TCCGCACCGT GCTCGACCTG CGTCGCCCAC ACGAGGTGGA CCGTGACGGG CGGATCCCGG ACTTCGCTGG GCTGACCTGG CGGCACATCC ACCCGGAGCA TGCCGAATGG TCCGATATCC CATTCCAACC CGGTGCCGAC CTCGCTCGCT ACCTCGCCGA CCGATACGCC GACCTGGCCA CGACCGGCAC CGCCGGCCTG GCCGCGGCGA TCGGGCTGAT CGCGGACGAG TCCAACGCCC CACTCCTGGT GCACTGCGTC GCCGGCAAGG ACCGAACCGG CATCGTCTGT GGACTCACCC TGGCCGTACT GGGCGTCTCC GACGACGACA TCGCCACGGA CTACGCGTTG AGCACCGCGG CCGGCGAGCG CTTCCAGGCC TGGTTCGCCA CAACGGGCAT GGCGGTGCAC CCGGCCCTGC CGCCGCTGAC CTGCCCCGAG GAAGCGATGC TGCTGTTCCT CGCCGAGCTG CGCGACTCCT ACGGCTCGGT CGAGGGCTAC CTGCGCCACG CGGGGGTCAG CGACGCCCAG GTGGCCGCAC TCCGCGACCA CCTGCTGGAG TAG
|
Protein sequence | MTVTSAGDTH RADRYRVRVD AIEVTRFNTL FNFRDVGGHA GHDGRTVRSG RLFRSDTPHR LAGADRTAFA SFGVRTVLDL RRPHEVDRDG RIPDFAGLTW RHIHPEHAEW SDIPFQPGAD LARYLADRYA DLATTGTAGL AAAIGLIADE SNAPLLVHCV AGKDRTGIVC GLTLAVLGVS DDDIATDYAL STAAGERFQA WFATTGMAVH PALPPLTCPE EAMLLFLAEL RDSYGSVEGY LRHAGVSDAQ VAALRDHLLE
|
| |