| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1117 |
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| Symbol | |
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| ID | 5706060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1261795 |
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| End bp | 1262715 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641270632 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001536016 |
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| Protein GI | 159036763 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.588683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00381219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGGTGT GGATCCCCCA CGAGCGCGGC CCATCCCTGC TCGGTGACCT GCCGGCAGGT
GTCACGGTGG AGGTGGCGGC GGAGCCTCAC CAGCTCCCGT CCCCGGTGGC CGGCGTCCGG
TTCTGGGTGC CGCCGTTCCT GGCTGAGGCG GACACCACCG AAATGCTGCG GGAACTGCCT
GACCTCGAGG TGGTGCAGCT CCTTACCGCA GGTGCGGACA CGTGGGTCGG CCGGATGCCG
CCGGGAGTGA CGCTCTGCGA CGGGCGCGGG GTGCATGACC AGGCCACTTC GGAGTGGGTG
GTTGCCGCGA TTCTGGCGCA CCTGCGGTCC TTCCCGGCGT TCATCCAGGC ACAGGCCCGT
CGGGAGTGGG CGTACGGCGA GTTGGCACCC ACCGACGAAC TGGCCGGCAA ACGGGTACTC
ATTGTCGGTG CTGGCTCGAT CGGCACGGCG GTCCGGGCCC GCCTTGCCCC GTTCGAGGTG
GGCCTCACCC TGGTGGCTCG GACCGCGCGT TCCGGCGTAC ACGCCGCCGA GGAGTTGCCC
CGGTTGCTGC CCGAGGCCGA CGTGGTGGTG CTGCTGGTGC CGTTGACCAA GCAGACCCGG
GGTCTGGTTG ATGCGGCCTT CCTGGCGGCG ATGCGCGACG GTGCCCTGTT GGTCAACGCG
GCCCGAGGGC CGGTGGCGCA GACCGAGGCG CTGGTCGCCG AGCTGGGTAC CGGTCGGATC
TCGGCCGTGC TGGACGTCAC CGATCCGGAG CCGCTGCCCA CGGACCATCC ATTGTGGACG
ATGCCGAACG TGCTGCTCAC CCCACACGTC GCAGGCTCGG TGCGGGGCTT GCTGCCGCGT
GCGTACCGGC TGGTGGGCGA CCAGATCCGC CGGTTCGCCG CGGGTGAGCC GCCGACCAAC
GTGGTGGTGG ACGGCTACTG A
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| Protein sequence | MKVWIPHERG PSLLGDLPAG VTVEVAAEPH QLPSPVAGVR FWVPPFLAEA DTTEMLRELP
DLEVVQLLTA GADTWVGRMP PGVTLCDGRG VHDQATSEWV VAAILAHLRS FPAFIQAQAR
REWAYGELAP TDELAGKRVL IVGAGSIGTA VRARLAPFEV GLTLVARTAR SGVHAAEELP
RLLPEADVVV LLVPLTKQTR GLVDAAFLAA MRDGALLVNA ARGPVAQTEA LVAELGTGRI
SAVLDVTDPE PLPTDHPLWT MPNVLLTPHV AGSVRGLLPR AYRLVGDQIR RFAAGEPPTN
VVVDGY
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