Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1106 |
Symbol | |
ID | 5706671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1244276 |
End bp | 1245451 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641270621 |
Product | aminotransferase class V |
Protein accession | YP_001536005 |
Protein GI | 159036752 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00753492 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATACC TGGATCACGC GGCGACCACT CCGATGCTCG ACGTGGCACT CGAGGCGTAC GTCGCCACCG CCCGCGAGGT CGGCAACGCA TCCGCCCTGC ACGTGGCGGG CCGCCATGCC CGCCGCCGAG TCGAGGAGTC GCGTGAGCGG GTGGCCGCCG CGCTGGGCGC CCGCCCCGCC GAGGTCATCT TCACGGGCGG TGGCACGGAA AGCGACAACC TCGCGGTCAA GGGCATCTTC TGGGCCCGTC GGTCCGCCGA CCGTCGGCGG ACGCGGCTGG TGTCCAGCGC GGTGGAGCAT CACGCGGTGC TCGACAGTGT CGACTGGCTG GCCGCGCACG AGAGCGCCGA GGTGGGTTGG CTGCCGGTCG ATGCCCTCGG CCGGGTCACC CCGCAGCGGC TCCGCGCCGA GTTGGCCGCG TCCGCCGATC GGGTGGCCGT GGTCACGACG ATGTGGGCCA GCAACGAGGT GGGTACGATC CAGCCGGTCA CCGAACTGGC CGAGGTCGCG GCCGAGTACG GGGTGCCCTT TCACACCGAC GCGATCCAGG CGGTCGGCCA GGTGGCGGTG GACTTCGCCG CCAGTGGCGT CTCGGCGCTC ACGGTGACCG GGCACAAGCT CGGCGGTCCC GCCGGGGTGG GCGCACTGGT GCTCGCCCGC GACGTCGCCG CGACCCCGCT CCTGCACGGT GGTGGCCAGG AACGGGACGT CCGTTCGGGA ACCCTGGACA CGGCCGGGAT CGTCGCCTTC GCCGCCGCGC TGGAGGCCGC GGTCCAGCAC CAGCAGGAGT ACGCGACCCG CGTCGCCGCC CTTCGGGACG ACCTCGTGGC ACGGGTGCGG CAGGTGGTGC CGGAGGCGGT GCTCAACGGT GACCCAGCCG GACGGCTGCC CGGCAATGCC CACTTCTCGT TCCCCGGGTG CGAGGGCGAT GCGCTGCTGC TCCTCCTCGA CGCGCAGGGC ATCGCCTGCT CCACCGGCTC GGCGTGCTCG GCCGGCGTCG CCCAGCCGAG CCACGTGCTG CTCGCGATGG GCGCCGATGG CGCCCGCGCC CGCTCCTCAC TGCGCTTCAC CCTCGGCCAC ACCAGCACAC CGGAGGAGGT CGACGCGCTG ATCGCGGCCC TACCGGAGGC GGTCGATCGA GCCCGTCGCG CCGGCGGCCT CCGCGCTCCG CGCTGA
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Protein sequence | MAYLDHAATT PMLDVALEAY VATAREVGNA SALHVAGRHA RRRVEESRER VAAALGARPA EVIFTGGGTE SDNLAVKGIF WARRSADRRR TRLVSSAVEH HAVLDSVDWL AAHESAEVGW LPVDALGRVT PQRLRAELAA SADRVAVVTT MWASNEVGTI QPVTELAEVA AEYGVPFHTD AIQAVGQVAV DFAASGVSAL TVTGHKLGGP AGVGALVLAR DVAATPLLHG GGQERDVRSG TLDTAGIVAF AAALEAAVQH QQEYATRVAA LRDDLVARVR QVVPEAVLNG DPAGRLPGNA HFSFPGCEGD ALLLLLDAQG IACSTGSACS AGVAQPSHVL LAMGADGARA RSSLRFTLGH TSTPEEVDAL IAALPEAVDR ARRAGGLRAP R
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