Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1087 |
Symbol | |
ID | 5704078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1225031 |
End bp | 1225858 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641270602 |
Product | hypothetical protein |
Protein accession | YP_001535986 |
Protein GI | 159036733 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0889477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGACGC ACAAGGCGTG GCAGGGGCGC CTGGTGGCGC ACCCGCTGCC GACTCACGAA CGCCTGCGGC ACTACGCCGG CTGGTGCACG GCGGTCGAGG GGAACACCAC GTTCTACGCG ACTCCTTCCC GGGAAACGGT GGCGTCCTGG GCGCAGCAGA CCGACCCCGA CTTCGGATTC GTCCTCAAAC TGCCCAGGGT CGTCACGCAC GAGCGCCACC TCGGTGATGT CGACGAACCG CTGCGCGCCT TCCTCCACGC GATCGAGCCC CTGGGCCCGC GGGCGCAGGC TCTCTGGATC CAGCTGCCGG GTTCGTTCGC TCCCGCCGAC GTGGCCACCC TCGCCCGCTT CCTGCGCCGC CTTCCCACAA CCCACCGGTA CGCGGTCGAG GTCCGTCACC CCGCGTTCTT CGTCGACTCC CGAGCGACCG CGCTGTTGGC GAGGACACTG GCCGCCACGT CCACCGAGTG GATCCCATTC GACACCACCA CGTTCTTCGC CCGCCCACCG ACCAGCGACG CGGAACGGGA CGCCTGGACG AAAAAGCCAC GGATGCCCCT GCGGTCGGAG GCGCTGACGG ACCGACCGAT CGTCCGCTAC CTCGGCTGCG ACGACCCGGA CCGGACGAGT GCGGGGTGGC AGCGGTGGGT TGCCACGGTC GCCGATTGGC TACACGAGGG CCGCTCACCC ACCCTCTTCG TCCACACTCC AGACAATGCC GACGCTCCGG TGCTCGCCCG CCGCTTCCAC GACGACGTAC GCGCCCGCGT CGCCGCGCTC GCGCCCCTCC CCGAACCACC CTCGGTGCAA CCGTTGACCC TCTTCTGA
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Protein sequence | MWTHKAWQGR LVAHPLPTHE RLRHYAGWCT AVEGNTTFYA TPSRETVASW AQQTDPDFGF VLKLPRVVTH ERHLGDVDEP LRAFLHAIEP LGPRAQALWI QLPGSFAPAD VATLARFLRR LPTTHRYAVE VRHPAFFVDS RATALLARTL AATSTEWIPF DTTTFFARPP TSDAERDAWT KKPRMPLRSE ALTDRPIVRY LGCDDPDRTS AGWQRWVATV ADWLHEGRSP TLFVHTPDNA DAPVLARRFH DDVRARVAAL APLPEPPSVQ PLTLF
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