| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1077 |
|---|
| Symbol | |
|---|
| ID | 5704345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1208621 |
|---|
| End bp | 1209634 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641270592 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001535976 |
|---|
| Protein GI | 159036723 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00107266 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGCG GGCTACGGGA GATTCAGGTA GCGGTGGTCA CGGGTGCCAG CGGCGGCGTC
GGGCGGGCCA CCGTACGGCA GCTGGCGCGG CCGGGGATCG CGATCGCCCT GTTGGCCCGC
GGTCGCACCG GCCTCGACGC CGCGGCCGAG GACGTCCGCT CCGCCGGTGG CCACGCCATG
CCGATCGAGG TGGACATGGC CGACTTCGAC CAGGTCGCCG CCGCCGGTCA GCGCGTCGAG
GACGAACTGG GGCCGATCGA CCTGTGGATC AACGTGGCCT TCAGTTCGAT CTTCGCACCC
TTCATGCAGA TTCGGCCCGA GGAGTTCCGC CGCACCGCTG AGGTCTCATA CCTCGGTTAC
GTCTACGGGA CACGGGTGGC GTTGGATCAC ATGACCCGGC GCGATCGGGG CACCATCGTG
CAGGTCGGGT CGGCCTTGGC CTACCGGGGA ATTCCCCTGC AGTCCGCCTA CTGCGGGGCC
AAGCACGCCA TCGTGGGGTT CACCGAGTCA CTGCGCTGTG AGTTGCTGCA CGACAAGAGC
AACGTCAAGG TCACCATGGT GCACCTGCCC GCGATGAACA CACCACAGTT CTCGTGGCTG
CTGTCCCGGC TGCCACGGCA CGCCCAGCCG GTCCCGCCCA TCTACGAGCC GGAGGTCGCC
GCCCGTTCCA TCGTCGCCGC CGCGGCCCGG CCCGGCCGGC GAGCGTACTG GGTGGGTACC
CCCACGGCGC TGACCATCGT GGGTAACCGT CTGGTTCCGG GTCTGCTGGA TCGCTACCTG
GGCCGGACCG GCTACCGCTC GCAGCAGACC GACCAGCCCG TCGACCCGGA CCAGCCGGCG
AACCTGTGGC AGCCGGTCGA CGGACCGGGC GGCCACGACC ACGGCGCGCA CGGCGCGTTC
ACCGACCGGT CACTGCGGCA CAGCCCGCAG GCGTGGCTGT CCCGGCACCG GATGGTCTCG
GTAGCGGGAG TGGCCGGGCT GTTGTTCGGC GTTCTCGCCT GGCGTCGACA CTGA
|
|---|
| Protein sequence | MGRGLREIQV AVVTGASGGV GRATVRQLAR PGIAIALLAR GRTGLDAAAE DVRSAGGHAM
PIEVDMADFD QVAAAGQRVE DELGPIDLWI NVAFSSIFAP FMQIRPEEFR RTAEVSYLGY
VYGTRVALDH MTRRDRGTIV QVGSALAYRG IPLQSAYCGA KHAIVGFTES LRCELLHDKS
NVKVTMVHLP AMNTPQFSWL LSRLPRHAQP VPPIYEPEVA ARSIVAAAAR PGRRAYWVGT
PTALTIVGNR LVPGLLDRYL GRTGYRSQQT DQPVDPDQPA NLWQPVDGPG GHDHGAHGAF
TDRSLRHSPQ AWLSRHRMVS VAGVAGLLFG VLAWRRH
|
|---|
| |