Gene Sare_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1058 
Symbol 
ID5705671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1187091 
End bp1188017 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID641270574 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_001535958 
Protein GI159036705 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.214353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0195486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCT CACCGGTACT CCTCAGCGCG CCGCGCTATG TCCTGGGCGA GATCGAGGAA 
CCGTACACCG CGGTCCAGGA CCTGGCGGCC CGTGTGGCGC AGTTCGCCAT CCCGATGGCT
CCCGAGAGTT GGGGCTGGGG CAGCTTCTTC CGCACTGAGG GCACGTTGGT GGAACTGGCG
GTCGCCAGTG GGAACGTCAC GCTCGACGCT TCCGGGGCGG CGCGCGACAC GGTGGACGGT
CTGATCATCT GTACCAGTTC GTTCCCGCGG TCGGTGGACG ACCACGCGGG CTTCCTCGGC
TCGGTGCTGG ACGGACTGGG GTTGACGAAG GTGGCGTTCG CCGCTGGGGT GACCCTCAAC
CGGTGCAACA ACCTACTCGC GGCCCTGCAT CTGGCGCGCT GCCTGGTCAG CTCCGGTAGT
CACCGGCTGA TCCTCGTGGT GGCCGCGGAC CGGGTCGTCG ACGAGGCGGC ACGGCTGGAG
AAGTTCGCGC TGTTCAGCGA TGGCGCGGCG AGTTGTCTGG TGGGTGCCGA GGAGCAGGGG
TCGGACTCCT TCGAGGTCCT TGCCTCCGCC TCGGCGCAGG ACCCGACGGT GCTCGGGGTG
CGCGACGAGA TCGACTCCCG GCTCGCCATC GCGGTCAACG ATGAGCTGGA GCGCACCACC
GGTGTCTCCC CGGAGAAGGT CACCGCGCTC CTTCCGGCCA ACCTGGTCCG GCCACTGACC
ACGCTGAAGG AGCGTCAGGC GGGCTTCACC CCCGCGCAAC TGCGCCTGGG CAACGTCGAG
CGGATCGGCC ACTGCTTCGC CAACGACCCG GTGATCAACC TCGCCGATCT CGTGGCCTCG
GGAGAGGGGG AGATCGATGG GCTTTACCTG CTGGCCTCCA GCGTGCCCGG TGCCCGCCAC
GGCGTACTGC TCCGGAAGGT CTCGTGA
 
Protein sequence
MDTSPVLLSA PRYVLGEIEE PYTAVQDLAA RVAQFAIPMA PESWGWGSFF RTEGTLVELA 
VASGNVTLDA SGAARDTVDG LIICTSSFPR SVDDHAGFLG SVLDGLGLTK VAFAAGVTLN
RCNNLLAALH LARCLVSSGS HRLILVVAAD RVVDEAARLE KFALFSDGAA SCLVGAEEQG
SDSFEVLASA SAQDPTVLGV RDEIDSRLAI AVNDELERTT GVSPEKVTAL LPANLVRPLT
TLKERQAGFT PAQLRLGNVE RIGHCFANDP VINLADLVAS GEGEIDGLYL LASSVPGARH
GVLLRKVS