| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1044 |
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| Symbol | |
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| ID | 5706543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1168917 |
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| End bp | 1170932 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641270560 |
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| Product | methionine--tRNA ligase |
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| Protein accession | YP_001535944 |
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| Protein GI | 159036691 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase
[COG0662] Mannose-6-phosphate isomerase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.120671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCA GCAAGTACGA CCCGGATCTC CTGGAACCGG CCTTCGGCAT CGGCATGAGC
GCCGTCGAGG GGCTCGGGAC AGGTGCCGGC TGGGGGCGGG TCGCGCCGGG TGGGGCGTCC
ACCAGCCACC AGCACGACGA AACCGAGTTC TTCGTTGTCG TCGCCGGTGA GGGAGAGTTC
GTCGTGGATG GTCGCCGCCA TCCGGCCCGG CCCGGCACGC TGGCCCTCTT CGAACCGTTC
GAGTCGCACG TGCTGGAGAA CACCGGCGAT GACGACCTGG TCTTCCTCAC GCAGTACTGG
CGCGACACCG GACGTGCCCT GATCTCGGCC GGGAACAACG AGCGGCTCGC GTTCGGTGAC
CGCCCGGTGT TCGTCTTCTC CACCCCGCCG ACGCCCAACG GCGACCTCCA CCTCGGGCAC
CTTTCCGGCC CGTACCTGGG CGCGGACGCG TTCGTCCGGT TCCAGCGGAT GAACGGTACC
GAGGCATGGC ACCTGACGGG CAGCGACGAC TACCAGAGCT ACGTGGTGAA CACCGCACGG
CGGGAGGGCC GCGCGCCCGC GGAGACCGCC GCACGCTACA GCGCCGAGAT CGCACAGACC
CTGGCCATGA TGGACATCAA CCCTGACCAG TACACGGTCA CTGACACCGA ACCCGGCTAC
CGGCAGGGCC TGCGGAACTT CTTCTCCCAG GTGATCGCCT CCGGGCGAGC CACGGTCACC
GAGCGGGACG CCCTCTTCGA CGGTGAGAGC GGTCGATACC TGTACGAGGC GGATGTCCGG
GGTGGCTGCC CCGGCTGCGG CGAGAGCACG AGCGGCAACA TCTGCGAGGA GTGCGGCGAG
CCCAACACCG TGGTGGACCT CAGGCAGCCG AGGTCGAACG AGTCCGACGC CGAGCCGCGG
CGGGCCCCGC TGGCCCGCTG GTCGCTGCCG CTGCACCAGT TCCGTGACGA AGTCTCCACC
CACCACAGCC TCGGCCGCGT GCCTGCCCGG CTGCGGGAAC TCGGAGACCG CCTCTTCGCC
CGCCCCGTCC TGGACATCCC GCTGTCGCAC CCCGCCGACT GGGGCGTCCC CCCGGCGGAG
AAGGACGTCG ACGACCAGGT CATCTGGGTC TGGCCCGAGA TGTCGTACGG ATTTCTGCAC
GGCATCGAGG CGCTGGGCGC CCGACTGGGC CGCGGTTGGC AGGCCGCCGT ACCCGAGCAG
GACTGGAAGA TCGTCCACTT CTTCGGCTAC GACAACAGCT TCTACCACGC GGTGCTCTAC
CCGGTGCTGT ACCGGCTGGC CCATCCCGGA TGGCAGCCGG ACATCGACTA CCACGTCAAC
GAGTTCTATC TACTGGAGGG CGAAAAGTTC TCGACCAGCC GGCGGCATGC CATCTGGGGC
AAGGAGATCC TCGACGAGGA CACCGTCGAC GCGGTCCGCT ACTTCCTCAG TCGCACCCGG
CCCGAGGCCG AGCGCACCAA CTTCCGGCGC GCCGACTTCC GGTCGGTGCT GCACGACACG
CTGATCGGCA CCTGGCAGCG CTGGCTGAAC GACCTCGGCG CCCGGATCGC CAGGCACTAC
GACGGCAAGG CTCCCGACGC GGGCATCTGG ACGCCGGAGC ACTCGGCGTT CCTGGCCCGG
CTCGGCGGCC GGCTCGACGC GGTCACCGGC TGCCTCCGCG CCGACGGCTT CAGCCTCAAC
CAGGCCGCTG CGGAACTCGA CGCGTTGGTC GCGGAGACCC TACGCTTCGT CGGCCGGGAG
GCCCGTACCG CGCGGAGCGC CGGGTGGCAG GACGAAGCCC GTACCGCGGT CGCCTTGGAA
CTGGCCGCGG CCCGCCTCCT CGCCTCGGTC GCAACGCCGC TGATGCCACG CTTCGCGGGT
CACCTGGCCA CCGCTCTCGG CCTGCCGAAG CCCACCGTAT GGCCACAAGC GGTGGAACTC
GTTCCACCGG GGAGCGCCGT CTGCCTCGCC ACCACCGTGT TCTTCAGGCC CACCACCGAG
CCGGCCGGGA ACGAGGACCG GGGGTCGGAT CGATGA
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| Protein sequence | MIFSKYDPDL LEPAFGIGMS AVEGLGTGAG WGRVAPGGAS TSHQHDETEF FVVVAGEGEF
VVDGRRHPAR PGTLALFEPF ESHVLENTGD DDLVFLTQYW RDTGRALISA GNNERLAFGD
RPVFVFSTPP TPNGDLHLGH LSGPYLGADA FVRFQRMNGT EAWHLTGSDD YQSYVVNTAR
REGRAPAETA ARYSAEIAQT LAMMDINPDQ YTVTDTEPGY RQGLRNFFSQ VIASGRATVT
ERDALFDGES GRYLYEADVR GGCPGCGEST SGNICEECGE PNTVVDLRQP RSNESDAEPR
RAPLARWSLP LHQFRDEVST HHSLGRVPAR LRELGDRLFA RPVLDIPLSH PADWGVPPAE
KDVDDQVIWV WPEMSYGFLH GIEALGARLG RGWQAAVPEQ DWKIVHFFGY DNSFYHAVLY
PVLYRLAHPG WQPDIDYHVN EFYLLEGEKF STSRRHAIWG KEILDEDTVD AVRYFLSRTR
PEAERTNFRR ADFRSVLHDT LIGTWQRWLN DLGARIARHY DGKAPDAGIW TPEHSAFLAR
LGGRLDAVTG CLRADGFSLN QAAAELDALV AETLRFVGRE ARTARSAGWQ DEARTAVALE
LAAARLLASV ATPLMPRFAG HLATALGLPK PTVWPQAVEL VPPGSAVCLA TTVFFRPTTE
PAGNEDRGSD R
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