| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1040 |
|---|
| Symbol | |
|---|
| ID | 5706539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1164548 |
|---|
| End bp | 1166341 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641270556 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001535940 |
|---|
| Protein GI | 159036687 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.270253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.341952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGAGT CGACATCGCC ACCGTTGTAC GAGGTGCCGG AGAAGGGCGG GCTCGCTGAC
CTCATCGCGA GTAACGCCGC CGAGGATCCG GATGCGCCGG CATTCCACCG TAAAGTCGAC
GGCCGGTGGG AGCCGGTCAG CGCCGCGGAG TTCTACACCG AGGTCACCGA CCTGGCCCGA
GGGTTGATCG CCAAGGGCGT CGAGCGCGGG GACCGCGTGG GTCTGCTCTC CGGCAACCGG
TACGAGTGGT CGCTCGTGGA CTTCGCCCTG TGGGTGATCG GCGCGGCGCC GGTGCCGATC
TATCTGACCT CCTCGACCGA GCAGATCGAG TGGATTCTCG GCGACTCTGG TGCGGTAGCG
GTTGTGGTGG AGACCGAGGC GCACGAGAAC GTGATCCAGG GAATGCGGGG CAAACTACCC
GCGCTGCGAC ACGTCTGGCA GATCGACGGT GGTGCGGTGG CGCACCTGCG AGCCGCGGGG
GCCGACGTCG ACCCCGCCGC CGTCGAAGAG CGTCGGACGG CCGTGCTCCC GGAGGACACG
GCCACGATCA TCTACACCTC CGGCACCACC GGGATGCCCA AGGGTTGCGT GCTCAGCCAT
GCCAATCTGT TCGCCGAGGC GGGTAACGCC GTAGCTCTGC TGCGCGCCAT GTTCGGTCCG
CTCGGCGACA TCCCGGCATC GACACTGCTG TTCCTGCCTC TTGCCCACGT CTTCGGCAGG
ATGGTGGAGG TCGGTGCCAT GGTGGCGCGG ACGCCCATCG CGCACTGCTC CGACGTCAAG
CAGGTGCCCG CGGAACTGAT CAGCTACAAG CCGACATTCC TGCTCTCGGT TCCCTACGTG
CTGGAGAAGG CGTACAACAC CGCCCGGCGC AAGGCTTACG AAGCTGGCAA GGGCAAAGTG
TTCGACACCG CGGCGGCGAC GGCAATCGCC TACTCGGAGG CGCAGCGGCC CGGACTGGGC
CTGCGCATGC GACACGCCCT GTTCGAGCGA CTCGTGTACC GCAGGGTCCG GGCCGCCTTC
GGCGGGAACC TGCGTTTCGC GATCTCCGGA GGTGCGGCCC TGGGCGAGCG CCTCACGCAC
TTCTACCGCG GCTGTGGCAT CACCGTGTTC GAGGGTTACG GACTCACCGA AACCAGTGCC
GCGGTCACGG TCAACTCGCT GGATTCCTTC CGGCCGGGAA CCGTGGGCAG GGTCCTGCCG
AGCGTACGGA TGAGGATCGA CGACGACGGT GAGGTGCAGT GCACCGGTGG CCCGGTGTTC
GCGGGCTACT GGAACAACGA TGAGGCCAAT GCCGAGTCGT TCACCGAGGA CGGCTGGTTC
CGGACCGGTG ACATCGGGGA GTTCGACGAG TTCGGGCACC TGCGGATCAC CGGCCGTAAG
AAGGAGATCC TGGTGACCAG CGGCGGTAAG AACGTGTCGC CCGCCGTGAT CGAGGACCGC
ATCGCCGCCG CTCCGCTGGT CGCCCAGGCA CTCGTGGTGG GTGATGGGCA GAAGTACATC
GCCGCACTCA TCACCGTCGA CTCGGAGTAC CTGGAGCACT GGAAGACCGG CGCGGGCAAA
CCCGCCGACG CGGCGGTCTC CGACCTCATC GACGATCCCG ACCTTCTGCA CGAGCTGCAG
CGCGCCGTGG ACGAGGGCAA CGCGGCGGTG TCGACGGCCG AGGCGGTACG TCGGTTCCGT
GTTCTTCCCA AGGAGTTCAC TGTGGAATCG GGCCATCTGA CGCCATCGCT GAAGTTGCGT
CGCAGTGTCA TCATGGCGGA CTTCGCCGAC GAGGTAGCTG AGCTGTACAG CTAG
|
|---|
| Protein sequence | MRESTSPPLY EVPEKGGLAD LIASNAAEDP DAPAFHRKVD GRWEPVSAAE FYTEVTDLAR
GLIAKGVERG DRVGLLSGNR YEWSLVDFAL WVIGAAPVPI YLTSSTEQIE WILGDSGAVA
VVVETEAHEN VIQGMRGKLP ALRHVWQIDG GAVAHLRAAG ADVDPAAVEE RRTAVLPEDT
ATIIYTSGTT GMPKGCVLSH ANLFAEAGNA VALLRAMFGP LGDIPASTLL FLPLAHVFGR
MVEVGAMVAR TPIAHCSDVK QVPAELISYK PTFLLSVPYV LEKAYNTARR KAYEAGKGKV
FDTAAATAIA YSEAQRPGLG LRMRHALFER LVYRRVRAAF GGNLRFAISG GAALGERLTH
FYRGCGITVF EGYGLTETSA AVTVNSLDSF RPGTVGRVLP SVRMRIDDDG EVQCTGGPVF
AGYWNNDEAN AESFTEDGWF RTGDIGEFDE FGHLRITGRK KEILVTSGGK NVSPAVIEDR
IAAAPLVAQA LVVGDGQKYI AALITVDSEY LEHWKTGAGK PADAAVSDLI DDPDLLHELQ
RAVDEGNAAV STAEAVRRFR VLPKEFTVES GHLTPSLKLR RSVIMADFAD EVAELYS
|
|---|
| |