| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1017 |
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| Symbol | |
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| ID | 5708177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1138737 |
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| End bp | 1139327 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641270533 |
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| Product | oligoribonuclease |
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| Protein accession | YP_001535919 |
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| Protein GI | 159036666 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.105148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAGATC TACTCGTCTG GATCGACTGT GAAATGACCG GCCTGGATCT CGGCAGTGAC
AAGCTGATCG AAGTCGCCGC GCTCGTCACC GACCCAGATC TCAACGTGCT CGGCGAAGGT
GTCGACGTGG TGATCCACGC CGACGAGGCG GCGCTGGACA AGATGCCCGA GATCGTGGCG
ACGATGCACG CCAAGTCCGG ACTCACCGAG GAAGTCCGCC GCTCCACGGT CGGGCTCGCC
GAGGCCGAGG ACCTGATCCT CGACTACGTC ACCAGCCACG TGAAGGATCC GCGTACCGCC
CCGCTCTGCG GCAACTCGAT CGCCACCGAT CGTGGGTTCA TCGCCCGGGA CATGCCCCGG
CTGGACAACC ACCTGCACTA CCGGATGATC GACGTCTCCT CGATCAAGGA ACTCTGTCGG
CGCTGGTATC CCCGGGTGTA CTTCAGCCAG CCGCAGAAGG GCCTCGCGCA CCGGGCGTTG
GCCGACGTCC GCGAGAGCAT CCGCGAACTC GAGTACTACC GCCGGACGCT CTTCGTGCCG
CTGCCGGGAC CGGACGTGGA CAGCGCCAAG GCGATCGCCG CGAAGCTGTA G
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| Protein sequence | MADLLVWIDC EMTGLDLGSD KLIEVAALVT DPDLNVLGEG VDVVIHADEA ALDKMPEIVA
TMHAKSGLTE EVRRSTVGLA EAEDLILDYV TSHVKDPRTA PLCGNSIATD RGFIARDMPR
LDNHLHYRMI DVSSIKELCR RWYPRVYFSQ PQKGLAHRAL ADVRESIREL EYYRRTLFVP
LPGPDVDSAK AIAAKL
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