Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1008 |
Symbol | |
ID | 5704658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1130972 |
End bp | 1131742 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641270524 |
Product | cobalt ABC transporter, inner membrane subunit CbiQ |
Protein accession | YP_001535910 |
Protein GI | 159036657 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0328725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.157813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGTGCCG GGCACAGCCA GCTGCTGTAC CACGAGTCCG ACTCGCCCGT GCACAGGCTG CCACCGGAGG TGAAGATCGC GGCGATGGTG GCCTTCACCC TCGCCGTGGT CGCCACCCCC AGGGAGGCGT TCTGGGCCTT CGGTGGCTAC GCCGCGCTGG TCGCGGTGGT CGCCGCGGTG GCCCGGGTCG GGCCCGGTTG GCTGTTGCGC CGGTCGCTGA TCGAGCTGCC GTTCGTGCTG TTCGCCTTCG CCCTGCCGGT CCTCGGTGTG GGCGAGCGGG TGGACGTCGT CGGCCTGTCG CTGTCCGTCG ACGGGCTGTA CGGGGCGTGG AACATCCTCG CCAAGGGCAC CCTGGGTGTC CTCGCGTCAT TGCTACTGGC CGCGACCACC ACGACCCGGG ACCTGATCGT CGGGTTGGAC CGGCTGCGCT GCCCGCAGAT GCTCACCCAG ATCGCCGCGT TCATGCTGCG CTACCTGGAG GTGCTGGTCG GTGAGGCCCG GCGGATGCGG GTGGCCCGCC TGTCCCGGGG CGACGACCCG CGCTTCGTGT GGCAGTTACG GGGCTTCGCG ACCGGAGTCG GCGCCCTGTT CCTGCGCGCC TACGAGCGGG GGGAGCGGGT GTACCTGGCG ATGCTGGCGC GCGGCTACAC CGGGCGGATG CCCTCGGTGC GGCAGGGCGC GGACACGGCG ACACCCGGGC AGTGGCTGCT CGCGTCGAGC ATCCCGGCGG TGGCGGCCGG CGTCGCCGCC ACGGCCTTGG TCCTGACATG A
|
Protein sequence | MGAGHSQLLY HESDSPVHRL PPEVKIAAMV AFTLAVVATP REAFWAFGGY AALVAVVAAV ARVGPGWLLR RSLIELPFVL FAFALPVLGV GERVDVVGLS LSVDGLYGAW NILAKGTLGV LASLLLAATT TTRDLIVGLD RLRCPQMLTQ IAAFMLRYLE VLVGEARRMR VARLSRGDDP RFVWQLRGFA TGVGALFLRA YERGERVYLA MLARGYTGRM PSVRQGADTA TPGQWLLASS IPAVAAGVAA TALVLT
|
| |