Gene Sare_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1004 
Symbol 
ID5704686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1128542 
End bp1128958 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content70% 
IMG OID641270519 
Producthypothetical protein 
Protein accessionYP_001535906 
Protein GI159036653 
COG category[S] Function unknown 
COG ID[COG4405] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.416279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.139824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACAG ATCTGCCACC GTTCGAGTTC GCCTTCCCTG GTCCGTTGCG GGACAAGCTG 
GTCGCCGCGG TACTCGAGGG GGCCAAGACC ACCACGACAG GTCTGCGCCA GGACTACGAG
ATCGAGGGTG AGGCGCTACC GGTCGCGGGC GCCCGGGCGG CGGTGGTCGA TTCTGCTGGC
CGCCGGGTGG CCGTGATCGA GCTGACCGAG GTGCGGGTCA GCCGGCTCGG CGACGTGGAC
CTCGACCACG CCCGGGACGA GGGCGAAGGG TACGACTCGG TCGCCGCCTG GCGGGCGGCC
CACGAGGAGT ACTGGCACGG GGTGAACTAT CGAGGGTGGC TGGGCGATCC GGACTTCACC
GTGGACGACG ACACTCCGGC TGTGCTGGAG CGGTTCCGGC TCGTGGCGAC GCTGTGA
 
Protein sequence
MITDLPPFEF AFPGPLRDKL VAAVLEGAKT TTTGLRQDYE IEGEALPVAG ARAAVVDSAG 
RRVAVIELTE VRVSRLGDVD LDHARDEGEG YDSVAAWRAA HEEYWHGVNY RGWLGDPDFT
VDDDTPAVLE RFRLVATL