Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0983 |
Symbol | |
ID | 5703709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1107034 |
End bp | 1108791 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641270498 |
Product | cytochrome c oxidase subunit I type |
Protein accession | YP_001535885 |
Protein GI | 159036632 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.615245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000770913 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACCACCG TCGCACCGAA GCCGGTCGTG ACCCGGCCCT GGCCGGTCCG AGAGCCGGTC AAGGGTTCGG CTTTCGCCCG GCTGCTGCGT ACCACGGACG CGAAGCAGAT CGGGATCATG TATATGGTCA CCGCGTTCGT ATTCTTCATG ATCGGCGGCC TGATGGCCCT GATCATGCGG GCCGAGCTGG CGCGGCCCGG GCTGCAGTTC CTGACGCCCG AGCAGTTCAA CCAGCTGTTC ACGATGCACG GCACGATCAT GCTGCTGTTC TTCGCGACGC CGATCGTGTT CGCCTTCGGT AACTACATCG TGCCGATCCA GATCGGCGCG CCGGACGTCT CGTTCCCGCG GCTGAACAGC TTTGCCTACT GGCTCTTCCT GTTCGGCGGC ACGTTGGCCA CCGCCGGCTT CATCACGCCC GGTGGTGCCG CCGACTTCGG CTGGTTCGCG TACACCCCGC TGAGCAGCGT GGAGCACTCC CCGGGCGTCG GCGCGAACAT GTGGATCGTC GGGCTGGCGA TCTCTGGTCT GGGCACCATC CTCGGCTCGG TCAACATGAT CACCACGATC CTGACCCTGC GCGCGCCTGG CATGACCATG TTCCGGATGC CGATCTTCAC CTGGAACATG CTGGTCACCA GCCTGCTGGC GCTCCTGATC TTCCCGCTGC TGGCCGCTGC GCTGTTCGCG CTCGCCGCCG ACCGGATCCT CGGCGCCCAC GTGTACGACC CGGCGACCGG CGGCCCGCTG CTCTGGCAGC ACCTCTTCTG GTTCTTCGGG CACCCCGAGG TGTACATCAT CGCGCTGCCG TTCTTCGGCA TCATCTCCGA GATCATTCCG GTCTTCTCCC GCAAGCCGAT CTTCGGCTAC AAGGGCCTGG TCGCCGCGAC CGTCGCCATC GCCGCCCTGT CGATGAGTGT CTGGGCGCAC CACATGTTCG CCACCGGTCA GGTGCTGCTG CCGTTCTTCA GTTTCCTGAG CTTCCTCATC GCCGTCCCCA CCGGGATGAA GTTCTTCAAC TGGATCGGCA CCATGTGGCG GGGGCAGCTC AGCTTCGAGT CGCCGATGCT GTTCTCAATC GGCTTCCTGG TCACCTTCCT CTTCGGTGGC CTCACCGGCG TACTGCTGGC CAGCCCGCCG CTGGACTTCC ACGTCTCGGA CTCCTACTTC GTGGTGGCCC ACTTCCACTA CGTGCTGTTC GGCACGATCG TGTTCGCCGT CTTCGCCGGC ATCTACTTCT GGTTCCCGAA GATGTTCGGC CGGATGCTCG ACGAGCGGCT CGCCAGGGTC CATTTCTGGC TGACCATGGT CGGCTTCCAC ACCACCTTCC TGGTGCAGCA CTGGCTGGGT AACGAGGGCA TGCCGCGGCG GTACGCCGAC TACCAGGTCA TTGACGGCTT CACCACGCTG AACATGATTT CCACGGTCGG CGCGTTCATC ACCGGTATCT CGACGCTGCC GTTCATCTAC AACTGCTGGA AGTCGTACAA GGCGGGACCG GTGGTCGAGG TCGAGGACCC CTGGGGGCAC GGCAACTCGT TGGAGTGGGC GACCAGCTCG CCGCCGCCGT TGCGTAACTT CGACCGGATG CCGCGGATCC GTTCCGAGCG GCCCGCGTTC GACTACAAGT TCCCCGAGCT GGCCGCCGGT CAGACCCTGG CCGGCCCGCC CGAGGGTGGA GCCAAGCTGC TGACCAGCGA GTCCGACGGT GGCGCCAGTT ACCAGGAGGA CGTGGCGAGC GACCGGGACC GCCACTGA
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Protein sequence | MTTVAPKPVV TRPWPVREPV KGSAFARLLR TTDAKQIGIM YMVTAFVFFM IGGLMALIMR AELARPGLQF LTPEQFNQLF TMHGTIMLLF FATPIVFAFG NYIVPIQIGA PDVSFPRLNS FAYWLFLFGG TLATAGFITP GGAADFGWFA YTPLSSVEHS PGVGANMWIV GLAISGLGTI LGSVNMITTI LTLRAPGMTM FRMPIFTWNM LVTSLLALLI FPLLAAALFA LAADRILGAH VYDPATGGPL LWQHLFWFFG HPEVYIIALP FFGIISEIIP VFSRKPIFGY KGLVAATVAI AALSMSVWAH HMFATGQVLL PFFSFLSFLI AVPTGMKFFN WIGTMWRGQL SFESPMLFSI GFLVTFLFGG LTGVLLASPP LDFHVSDSYF VVAHFHYVLF GTIVFAVFAG IYFWFPKMFG RMLDERLARV HFWLTMVGFH TTFLVQHWLG NEGMPRRYAD YQVIDGFTTL NMISTVGAFI TGISTLPFIY NCWKSYKAGP VVEVEDPWGH GNSLEWATSS PPPLRNFDRM PRIRSERPAF DYKFPELAAG QTLAGPPEGG AKLLTSESDG GASYQEDVAS DRDRH
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