| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0956 |
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| Symbol | |
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| ID | 5704492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1078024 |
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| End bp | 1079124 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641270471 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_001535859 |
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| Protein GI | 159036606 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.112676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0742081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGCCG CGACGGTGCG CGTCACCGGC GACCTCGACC TCGCCGAGGA GTGCGTGCAG
GACGCGTACG TGATCGCGCT CGACGCCTGG CTGCACGACG GCGTCCCGGA CAACCCCGGC
GCTTGGCTGA CGACGACCGC ACGGCGGCGG GCCCTCGACG GCCGCCGCCG CGAGCGCACC
CTGCGCGCCA AGCTGCCGCT GCTGGTCGAA CCCGAGGAGT CCACGGTGGA GGACATCACC
GACGACCGGC TGCGCCTGCT CTTCACCTGC TGCCACCCGG CCCTCACCCG GGAGGCACAG
GTCGCGCTCA CGCTCCGGCT GGTCTGCGGG CTCACCACAG CCGAGATTGC TCATGCGTTT
TTGATCTCCG AGGCGACGAT GGCGGCCCGG CTCACCCGGG CCAAGAAGAG GATCGCCGCG
GCCCGGATCG CCTACCGCGC GCCGGCTCCC GAGGAGCTGC CGGACCGGCT GGACGCGGTA
CTGACCGTGG TGCACCTGCT CTACACCACC GGGCACACCG CCCCGGCCGG GGACCGGCTG
GTGCGGGTGG ACCTGGTGGA GAAGGTGTTC GACCTGGCCC GGATGCTGCG GATGCTCATG
CCCGATGAGC GGGAGGTACG CGGGCTGCTG GCCCTGCTGC TGCTCACCGA CGCCCGCCGG
GCGACCCGAA CGGCTACCGA TGGGCGGCTG CTTCTCCTCG CCGAGCAAGA CCGCGGCCGG
TGGGACCGGG CATTGATCGC CGAGGGCGCG GCGCTGGTCC CGGGCGCGCT GCGCGGCGGG
GCCGGCCGTT TCGCGCTGCA GGCGGCCATC GCGGCGCTGC ACGCCGAGGC ACCCACCTAC
GAAGACACCG ACTGGCGCCA GATCGTCGGC CTGTACGACG TGCTGCTGAC GGTCTGGACG
TCACCGGTGG TGGCCCTGAA CCGGGCGGTC GCTGTGTCCA TGGCGGACGG ACCGACCGCC
GCCCTGGCAA CCATCGAGGC GCTGGACGCC GACGGCCGGC TCGCCGGTTA CCGGTACCTG
CCGGCGACTC GGGCTGACCT GCTGCGGCGG CTGGGCCGGC ACACCGAGGC GGCGGCAGGT
ACCGGCAGGC GCTGGAGCTG A
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| Protein sequence | MLAATVRVTG DLDLAEECVQ DAYVIALDAW LHDGVPDNPG AWLTTTARRR ALDGRRRERT
LRAKLPLLVE PEESTVEDIT DDRLRLLFTC CHPALTREAQ VALTLRLVCG LTTAEIAHAF
LISEATMAAR LTRAKKRIAA ARIAYRAPAP EELPDRLDAV LTVVHLLYTT GHTAPAGDRL
VRVDLVEKVF DLARMLRMLM PDEREVRGLL ALLLLTDARR ATRTATDGRL LLLAEQDRGR
WDRALIAEGA ALVPGALRGG AGRFALQAAI AALHAEAPTY EDTDWRQIVG LYDVLLTVWT
SPVVALNRAV AVSMADGPTA ALATIEALDA DGRLAGYRYL PATRADLLRR LGRHTEAAAG
TGRRWS
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