Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0952 |
Symbol | |
ID | 5704488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1075870 |
End bp | 1076865 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641270469 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_001535857 |
Protein GI | 159036604 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0742081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGACG ATCGGTCCGT GGTTGCCAGT ATCGACTCTG CCTTGCTGTC GGCGGCGCAA GCCGGGGATT CGGACGCGTT CGCCGCTGTG GTCGACCCGT TCCAAGGGGA GTTGCACGCA TACTGCTATC GGATGCTGGG TTCCGTCCAT GACGCCGATG ACGCCGTTCA GGAGACGCTG GTCCGGGCCT GGCGGGCGTT TGACCGATTT GAGCCTCGTG GATCAATGCG GGCTTGGCTG TACCGGATCG CCACCAACCG GTGCCTGTCG ATTCTCAACG GGCGAGGCCG CCGGGAACTG CCGGCCGATC TCGAGCGCAT CGCGGGAGGC GACACCGAGA TCTCCTGGCT GGAGCCTTAC ACGGACGAGC GGCTGGGCCC GGAGCAACGC ACTGTCGCGA GGGAGAGCAT CGAGCTGTCG TTCGTTGCCG CGGTGCAGCG ATTGACCGGT AGGCAGCGTG CGGTGCTCCT GTTGCGGGAG GTGCTGGGCT TCACCGCCCG CGAGGTGGCT GACCAGCTCG ATACCACCGT GGCCGCCGTC AACAGCGCGC TGCAGCGCGC CCGCGCAGTT CTCGATCCGG GACTGCCCAC CGCGACCCAG CAGGCGACGA TGCGCCAGAT GGGTGACACC GCGGTTCGGG ACCTGGCCCG ACGGTACGCA CAGGCGTGGG AGGCGGCCGA TGTCGACACC ATCGTTTCGA TGCTGGTCGA GGACGCCCGC TACTCTATGC CGCCGGTGCC GACCTGGTTC ACCGGCCGGA AGGCCATCTG CGACTTTCTG CTCAGCGGCC CGCTGACGTG TGGCTGGCGG TTCGTGGCGA CCGAGGCGAA CAGTCAGCTT GCGTTCGGCA CGTATCGCTG GGACAGCGAC CACGCCGCTT ACCGTCCCTG CGGGCTGGAC GTCCTGACAC TGCGTCGAGA CGGCATCGCG GAGGTCGTGT CCTTCCTCGA AGCCGACTTC GCCGCGCACG GCCTGCCACC CAGCCTGCCG AACTGA
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Protein sequence | MCDDRSVVAS IDSALLSAAQ AGDSDAFAAV VDPFQGELHA YCYRMLGSVH DADDAVQETL VRAWRAFDRF EPRGSMRAWL YRIATNRCLS ILNGRGRREL PADLERIAGG DTEISWLEPY TDERLGPEQR TVARESIELS FVAAVQRLTG RQRAVLLLRE VLGFTAREVA DQLDTTVAAV NSALQRARAV LDPGLPTATQ QATMRQMGDT AVRDLARRYA QAWEAADVDT IVSMLVEDAR YSMPPVPTWF TGRKAICDFL LSGPLTCGWR FVATEANSQL AFGTYRWDSD HAAYRPCGLD VLTLRRDGIA EVVSFLEADF AAHGLPPSLP N
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