Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0948 |
Symbol | |
ID | 5706873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1073999 |
End bp | 1074202 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641270465 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001535853 |
Protein GI | 159036600 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.360484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.128926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACAG GTACCGTGAA GTGGTTCAAC GCCGACAAGG GCTTCGGCTT CATCAGCCCG GACGGCGGCG GCGCCGACGT CTTCGCCCAC TTCTCCGCGA TCTCGGCGAG CGGCTTCCGC AGCCTCGACG AGAATCAGAA GGTGGAGTTC GAGATCACCC AGGGCCAGAA GGGCCCGCAG GCGGAGAACA TCCGCCCGCT TTGA
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Protein sequence | MATGTVKWFN ADKGFGFISP DGGGADVFAH FSAISASGFR SLDENQKVEF EITQGQKGPQ AENIRPL
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