Gene Sare_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0926 
Symbol 
ID5704935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1041099 
End bp1041896 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content57% 
IMG OID641270445 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001535833 
Protein GI159036580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT TGTCAAGCCC GATCGCCTCG TTCATCGTCG CCGAGATCCG CCGCGCCAGA 
GGGTCGGCCG GCATGACACA AGAAGCGTTC GGGCGGGCCG CCGGATACGC CGCATCACAC
GTCAGTTCTG TCGAGAATGG CACACGGGCG CTAACAATCG ACTTCATCCG TGGGGCCGAC
CGAGGGCTAA ATAACGGTGG GTTGTTTGAA CGGATGATCG AAGAACTGGG GCGCCCATCC
TGGTTTTTGC CCTGGTTAGA TGCTGAACGT ACCGCAACGC AGCTCAGGTG CTTTCAGCCG
TCGCTGATTC CAGGCCTTCT GCAGACGCAG GACTACGCTC GTGCCGTTAT TAGGTGTGAC
GACCGGCTCA GTGATAACGA GGTTGACCGG AGGCTTGCCG AACGAATGAG TCGGCAAGAA
GTCTTGACTA AGAAAGATCC TCCGCACTTC ATCGCCGTTA TCGCCGAGTC GGTAATTCGT
AGGGCGGGCG AAGACTTTCG TGACATTATG GCTGCTCAGA TTAAGTATCT AATTTCACTT
GCCGAACGAC CCAATATTAG TATCCACATC CTGCCTGACG AAATTAGTAT GCATGTCGGG
CTTACTGGGC CGTTCAGCCT CGCCCGCACC GGCCATCAGT GGCTGGCGGA GATGGAGAAC
CAGCTAGGGG GCACGGTTGT AGACCAGGAC GATGACGTAG ATACTTTGCT GTCACGGTGG
GAGACGGTGC GCAACGAGGC ACTGCCCCGC CGCCAGTCAA TCGAGCTGAT GAAGGAAGTA
GTGGACTCAT GGACCTGA
 
Protein sequence
MADLSSPIAS FIVAEIRRAR GSAGMTQEAF GRAAGYAASH VSSVENGTRA LTIDFIRGAD 
RGLNNGGLFE RMIEELGRPS WFLPWLDAER TATQLRCFQP SLIPGLLQTQ DYARAVIRCD
DRLSDNEVDR RLAERMSRQE VLTKKDPPHF IAVIAESVIR RAGEDFRDIM AAQIKYLISL
AERPNISIHI LPDEISMHVG LTGPFSLART GHQWLAEMEN QLGGTVVDQD DDVDTLLSRW
ETVRNEALPR RQSIELMKEV VDSWT