Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0926 |
Symbol | |
ID | 5704935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1041099 |
End bp | 1041896 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641270445 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001535833 |
Protein GI | 159036580 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACT TGTCAAGCCC GATCGCCTCG TTCATCGTCG CCGAGATCCG CCGCGCCAGA GGGTCGGCCG GCATGACACA AGAAGCGTTC GGGCGGGCCG CCGGATACGC CGCATCACAC GTCAGTTCTG TCGAGAATGG CACACGGGCG CTAACAATCG ACTTCATCCG TGGGGCCGAC CGAGGGCTAA ATAACGGTGG GTTGTTTGAA CGGATGATCG AAGAACTGGG GCGCCCATCC TGGTTTTTGC CCTGGTTAGA TGCTGAACGT ACCGCAACGC AGCTCAGGTG CTTTCAGCCG TCGCTGATTC CAGGCCTTCT GCAGACGCAG GACTACGCTC GTGCCGTTAT TAGGTGTGAC GACCGGCTCA GTGATAACGA GGTTGACCGG AGGCTTGCCG AACGAATGAG TCGGCAAGAA GTCTTGACTA AGAAAGATCC TCCGCACTTC ATCGCCGTTA TCGCCGAGTC GGTAATTCGT AGGGCGGGCG AAGACTTTCG TGACATTATG GCTGCTCAGA TTAAGTATCT AATTTCACTT GCCGAACGAC CCAATATTAG TATCCACATC CTGCCTGACG AAATTAGTAT GCATGTCGGG CTTACTGGGC CGTTCAGCCT CGCCCGCACC GGCCATCAGT GGCTGGCGGA GATGGAGAAC CAGCTAGGGG GCACGGTTGT AGACCAGGAC GATGACGTAG ATACTTTGCT GTCACGGTGG GAGACGGTGC GCAACGAGGC ACTGCCCCGC CGCCAGTCAA TCGAGCTGAT GAAGGAAGTA GTGGACTCAT GGACCTGA
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Protein sequence | MADLSSPIAS FIVAEIRRAR GSAGMTQEAF GRAAGYAASH VSSVENGTRA LTIDFIRGAD RGLNNGGLFE RMIEELGRPS WFLPWLDAER TATQLRCFQP SLIPGLLQTQ DYARAVIRCD DRLSDNEVDR RLAERMSRQE VLTKKDPPHF IAVIAESVIR RAGEDFRDIM AAQIKYLISL AERPNISIHI LPDEISMHVG LTGPFSLART GHQWLAEMEN QLGGTVVDQD DDVDTLLSRW ETVRNEALPR RQSIELMKEV VDSWT
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