| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0905 |
|---|
| Symbol | |
|---|
| ID | 5706051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1017351 |
|---|
| End bp | 1019024 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641270423 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001535813 |
|---|
| Protein GI | 159036560 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.474957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.117481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGGTT GGGGCGCACG GCTGGTCGCC GGGCTGCACC AGACTTGGCG GCGCTCGTTG
CAGGTACGTG TGGTGACCAT CACGCTCCTG GCGTCCAGCC TGCTGGTCGG CGGGTTCGCT
TACCTCATCG CCGACAAGAT CACCAATATT CTGCTGGAGA ATGCCGAGGC CGATGTGCAG
GCCCGGCTGA ACAGTGGGGC GGTGTACGCG GCCAAACAGC TCGGGTTCTA CCACAAGCCG
CAGGAGGCGC AGTTCCAGGA GACCGTCGAC GGGACGGTGA ACTACCTGGC CGGCGGTGAT
CCTCAGCAGG CGACCGGCGT GGTGGTTGCC GTGATTGCCG ACGAGTTCGA CGGGGTGATC
CAGCCCCGGA CCGCCCCGGC GGTGGACAAT CTTGATGCGT TGATCAGTTC TGAGCTGCGC
GCGACGGTCG CCGGGGGTGA GGTCGCCAGC CAGATCGGCA CCGGCCGGCT CGGCGAGGCC
CACACGAAGT ACCTCGCCTA CGGGTCGCCG GTACCGACCC AGTTCGGTCA GGTCGAGCTC
TATTATCTCG TCCCGTTGGC TCGGCAGGAC GCCACCGCCG CCGATGCCCG GGCGACCGTG
GTCGCCACCG GCCTCGCCCT GGTGGTGCTG CTGGGGCTGC TCGCCGCTCT GGTGACCCGG
CTGGTGGTGA CGCCGGTCCG GGTAGCAGCC CGAACGGCGC AACGCCTCTC CGCCGGCCTG
CTCGACCAGC GAATGGCGGT CAACGGCGAG GACGACCTGG CGCTGCTCGC GGAGTCCTTC
AACCAGATGG CGACCAACCT GCAGCGGCAG ATCCTCCGGT TGGAGGAGAT GTCTCGCCTG
CAACGCCGAT TCACCTCGGA CGTCTCGCAC GAGCTGCGGA CCCCGTTGAC CACGGTTCGG
ATGGCCGCGG ACCTGATCTT CGCTGAGCGG GATGAATTCG ACCCGGCGGT GGCTCGCAGC
GCCGAGTTGC TCCAGACGGA GCTGGACCGG TTCGAGGAAC TGCTGACCGA CCTGCTGGAA
ATCAGCCGCT TCGACGCCGG TTTCGCTGCG CTCGACGCCG AGCCCACCGA TCTGGTGCCG
GTCGTGCACC GGGTCGCGGG CCGGCTGGCC GGCCTCGCCG AGCGGGTCGG TGTCACGGTC
GAACTGGATG TGCCCGGCGG TCCGGTGATC GCCGAAGTCG ACCAGCGTCG CGTCGAGCGT
GTCCTGCGGA ATCTGGTCGG CAACGCGGTC GAGCACGGCG AGGGCAAACC GGTGCGGATC
ACCCTGGGTG TGGACGAGGC CGCGGTGGCG GTCACCGTGC GCGATCACGG TTTGGGACTC
AAGCCCGGGG AGGAGAAGCT GATTTTCAAT CGGTTCTGGC GGGCCGACCC ATCACGTGCC
CGACAGACCG GGGGGACCGG GTTGGGCCTG TCGATCAGCC TTGAGGACGC CCGGCTGCAC
CGCGGATGGC TGGAGGCGTG GGGTGCGCCG GGGCAGGGCG CCCAGTTCCG GCTCACCCTG
CCGGCGCGGG CCGGCGACCG GCTGACCGCC TCGCCACTGC GATTGGTGCC CGCCGACGCG
AGACTGCCCT GTGGTGGTCC GCGCGAGGGC GGTCTGCTCG CCATCGGTCA GGGCAGCGCG
GGCGCGTTGG CAGTTGATCC CGCGCCGGCC GCGCCTGCCG AGGCCCAGCG GTGA
|
|---|
| Protein sequence | MGGWGARLVA GLHQTWRRSL QVRVVTITLL ASSLLVGGFA YLIADKITNI LLENAEADVQ
ARLNSGAVYA AKQLGFYHKP QEAQFQETVD GTVNYLAGGD PQQATGVVVA VIADEFDGVI
QPRTAPAVDN LDALISSELR ATVAGGEVAS QIGTGRLGEA HTKYLAYGSP VPTQFGQVEL
YYLVPLARQD ATAADARATV VATGLALVVL LGLLAALVTR LVVTPVRVAA RTAQRLSAGL
LDQRMAVNGE DDLALLAESF NQMATNLQRQ ILRLEEMSRL QRRFTSDVSH ELRTPLTTVR
MAADLIFAER DEFDPAVARS AELLQTELDR FEELLTDLLE ISRFDAGFAA LDAEPTDLVP
VVHRVAGRLA GLAERVGVTV ELDVPGGPVI AEVDQRRVER VLRNLVGNAV EHGEGKPVRI
TLGVDEAAVA VTVRDHGLGL KPGEEKLIFN RFWRADPSRA RQTGGTGLGL SISLEDARLH
RGWLEAWGAP GQGAQFRLTL PARAGDRLTA SPLRLVPADA RLPCGGPREG GLLAIGQGSA
GALAVDPAPA APAEAQR
|
|---|
| |