| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0896 |
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| Symbol | |
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| ID | 5704231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1006358 |
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| End bp | 1007638 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641270414 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_001535804 |
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| Protein GI | 159036551 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0355459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGACC CGTGGCTCGC CCTGGAAATC GGCGTCGATC CGGCGGAGCG GATCGCGCAG
GTGGGTGTTG CCCACACGGC GTTCCTCACC GGGGCGACGC CACAGCGGGT ACGGGACGTG
GTGCGCCGAT CGTGGGAACG GTCGATGCCC CTCGACCCGG AGGGCACCCC GCCCGTCGAC
CTCGTCGACG ACACGCTGGA GAGCTACCGT GCCGGGCATC CGCTGGCCCC GGTGCTGCCG
ATCTTCCGGG ACCTGCTCGG TGGGATCGCC CAGGACGGCG CGCACCTGTT GGCGGTCTGC
GACACGCACG GCCGCCTGCT CTGGGTGGAG GGGCACCCGG GGTTGCTACG ACGGGCCGAG
GGGATGAACT TCGTGCCCGG GGCCCGCTGG GACGAGGCGC ACGCTGGCAC CAACGCACCC
GGCACCGCCC TCGCCGTGGA CCACAGCGTG CAGATCTTCG CCACCGAACA TTTCTGCCGC
CGTGTCCAGC GCTGGACCTG CGCCGCCGCG CCCATCCACG ATCCGGCCAC CGGCCGGATA
CTCGGCGCGG TGGACATCAC CGGCGGTAAC CACCTCGCCA CCCCGCAGAG CCTGGCGCTG
ATCCGGGCCA CCGCACGGGC CGCCGAGGCG TTCCTGGCCG CGCACGCGCC GATCGAACCG
GACGTGGTGC AGGTGTCCGC GCTTGGCCGG GACGAGGCGC AACTACAGGT CGGTGGCCGT
CGCATCCGGC TCGGTCGCCG GCACAGCGAG CTGCTGGTGC TGCTGGTGGA CCACCCCGAG
GGGCGCACCG GGGAGCAACT CGCCCTCGAC CTCTACGGCG AGGACCGGCC GCACCCGGTC
ACTGTTCGGG CCGAGCTGTC CCGGCTCCGC CGCGTGCTGG GCCCGGAGTT GCTCGACTCC
CGCCCGTACC GGCTGCGCTG CCGGGTACGC GCCGACTTCC GTACTGTCAC CGACCGACTG
GAGCGGGGCG ACCCGGCGGG CGGGCTCGAC GCGTACCCCG GGAGTCTGTT GCCCGGCTCG
GACGCGCCGG GCGTGGCGAG GCTGCGCCGG CTGGTCGACG GCCAGCTACG CGCGGCCGTG
CTGGCTGCCG CGGATCCGGC CCTGCTCGCG GCGTGGACCG CGACGCCCGC CGGCACCGAC
GACCTGACGG CCTGGGAGGC CCTGGCGCGG GTGTTGCCGC CGGGCGCACC TCGCCGGCCC
CTCGCCCTCG CGCGGGCCCG CCAGCTCGCC CGAGAGTACG GCGTGAGCCG TGCAACGTCG
CTGCAACGTC GACAAAAATA G
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| Protein sequence | MVDPWLALEI GVDPAERIAQ VGVAHTAFLT GATPQRVRDV VRRSWERSMP LDPEGTPPVD
LVDDTLESYR AGHPLAPVLP IFRDLLGGIA QDGAHLLAVC DTHGRLLWVE GHPGLLRRAE
GMNFVPGARW DEAHAGTNAP GTALAVDHSV QIFATEHFCR RVQRWTCAAA PIHDPATGRI
LGAVDITGGN HLATPQSLAL IRATARAAEA FLAAHAPIEP DVVQVSALGR DEAQLQVGGR
RIRLGRRHSE LLVLLVDHPE GRTGEQLALD LYGEDRPHPV TVRAELSRLR RVLGPELLDS
RPYRLRCRVR ADFRTVTDRL ERGDPAGGLD AYPGSLLPGS DAPGVARLRR LVDGQLRAAV
LAAADPALLA AWTATPAGTD DLTAWEALAR VLPPGAPRRP LALARARQLA REYGVSRATS
LQRRQK
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