| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0888 |
|---|
| Symbol | fbiC |
|---|
| ID | 5704244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 997764 |
|---|
| End bp | 1000274 |
|---|
| Gene Length | 2511 bp |
|---|
| Protein Length | 836 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641270407 |
|---|
| Product | FO synthase |
|---|
| Protein accession | YP_001535797 |
|---|
| Protein GI | 159036544 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0248143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATC GCACGGAGCC GGGCCCGACC GACGCGAGTG TGCGGCGGGC GCTGCGTCGA
GCGGCGTCCG GGCGGGCGCT GGACACCGAC GAGGCGACGG CGCTTCTCGC CGCCCGGGGC
GCCGAGCTGG ACGAGTTGCT GCGGGTCGCC GGGGCCATCC GGGACGCGGG ACTACGCGCG
GCCGGGCGAC CGGGCGTGGT GACGTACTCG AAGAAGGTTT TCATCCCGCT TACCCGGCTC
TGCCGGGACC GGTGTCACTA CTGCACCTTC GCCACGGTGC CGCACCGGCT GCCGGCGGCG
TTCCTCGACC GCGACGAGGT GCTGGCGATT GCCCGTCAGG GTGCGGAGCT CGGCTGCAAG
GAGGCGCTGT TCACACTCGG CGACCGGCCG GAGGAACGCT GGCCGGCAGC CCGCCAGTGG
CTGGACGAGC GCGGGTACGA CTCGACCCTG GACTATCTGC GCTCCTGCGC GGTGGCCGTG
CTGGAGGAGA CGGGGCTGCT ACCGCACCTC AACCCTGGTG TGCTCAGCTG GTCCGAACTG
CAGCGACTCA AGCCGGTCGC GCCGAGTATG GGCATGATGT TGGAGACCAC CGCCACCCGG
CTGTGGTCCT CCCCAGGGGG TCCGCACTAC GGTTCGCCGG ACAAGGAACC GGCTGTCCGG
CTGCGGGTAC TCGACGACGC GGGTCGGGTG AACGTGCCGT TCACCACCGG TGTCCTGATC
GGCATCGGTG AGACCCCGGT CGAGCGGGTC GAGGCGCTCT TCGCGATCCG CCGGGCGCAC
CGGGAGTACG GCCACCTCCA GGAAGTCATC GTGCAGAACT TTCGCGCCAA GCCGGACACG
GCGATGCGGG GTATGCCCGA CGCGACGCTG CACGACCTCG CTGCCACGGT GGCGGTGACC
CGGGTGCTGC TCGGTCCACA GGCCCGCGTC CAGGCGCCCC CGAACCTCAT CGCGGGTGAG
TACGACCTGC TGCTGCGGGC AGGTATCGAC GACTGGGGCG GCGTCTCGCC GTTGACTCCG
GATCACGTGA ACCCGGAACG GCCCTGGCCG CAGCTCGACG AGTTGTCTCG GCGTACCGAG
CAGGCCGGGT TCTCCCTGCG GGAGCGGCTG ACGGTCTACC CGGAGTACGT CCGGGCCGGT
GATCCGTGGC TCGACCCGCG CCTGTTGCCG CACGTCGGTG CCCTGGCGGA TCCGGCGACC
GGGCTCGCGA GGCCCACGGC CCGGCCGGTG GGCCGGCCGT GGCAGGAACC GGACGAGGAG
TACGGGGGCC GGACCGACCT GCACGCCACC ATCGACACCA CCGGCCGTAC CGCCGACCGG
CGGGGCGACT TCGACCAGGT CTACGGTGAC TGGTCGATGG TGGCCGACCG GGTGGGTGCG
GGAGCGACAG TCGGAGTTGG TGATCATGAA CTGCGGGCCG GTCTGCGGCT TGCCGCCGAC
GATCCGGCGG CGCTGCTGGA GCCCGGACAC ACCGAGGCGG CGCTGGCACT CTTCGCGGCG
GATGGTCCGG CGCTCGACGA GTTGTGCCGC ATCGCGGACG AGGTGCGCCG GGACGCGGTC
GGTGACGAGG TCACCTATGT GGTCAACCGC AACATTAATT TCACCAATGT CTGCTACGTG
GGCTGTCGGT TCTGTGCCTT CGCGCAGCGC GATCGGGACG CCGACGCGTA TCGGCTCTCG
GTGGACCAGA TCGCCGACCG GGCCGAGCAG GCATGGCTGG CCGGCGCCAG CGAGGTCTGT
CTCCAGGGGG GCATCGACCC GAGACTGCCG GTGACGGCCT ACGCCGACCT GGTGCGGGCG
ATCAAGGCCC GGGTGCCGGG CATGCATGTG CACGCCTTCT CTCCCATGGA GATCGTCACC
GCGGCTGGCA AGGCGGGTGT GCCGATTCGG GAGTGGCTGA CCGGGTTGCG TGAGGCCGGG
CTGGACACCA TTCCCGGCAC CGCCGCCGAG ATCCTCGACG ATGAGGTGCG CTGGGTCCTC
ACCAAGGGCA AGCTGCCGAC GGCCGCCTGG GTCGAGGTGG TCACCACCGC CCATGAGCTG
GGAATTCGAT CCAGCTCCAC GATGATGTAC GGGCACGTTG ACCATCCCGC ACAGTGGCTC
ACGCATTTCC GGGTGCTGGC TCGTACGCAG GACCGTACGG GTGGTTTCAC CGAGTTCGTG
GCGCTGCCGT TCGTGCATAC CAACGCACCG ATCTACCTGG CCGGCATCGC CCGCCCGGGG
CCGACCTGGC GGGAGAACCG GGTGGTGCAC GCGATGTCCC GGCTGCTGCT GCACGGACGG
GTCCACAACA TTCAGTGTTC GTGGGTGAAG CTGGGCGACG AGGGTAGTGC CGAACTGTTG
CGTGGTGGTT GCAACGATCT GGGCGGTACC CTGATGGAGG AGACGATCTC CCGGATGGCT
GGCTCCGGCA ACGGGTCGGC CCGTACCGAG GAGCAGCTGA TCGCGATCGC GGCGGCGGCC
GGGCGGCCAG CGCGTAAGCG GACGACCGCC TACGGTCATC GAGCCGGGTA G
|
|---|
| Protein sequence | MVDRTEPGPT DASVRRALRR AASGRALDTD EATALLAARG AELDELLRVA GAIRDAGLRA
AGRPGVVTYS KKVFIPLTRL CRDRCHYCTF ATVPHRLPAA FLDRDEVLAI ARQGAELGCK
EALFTLGDRP EERWPAARQW LDERGYDSTL DYLRSCAVAV LEETGLLPHL NPGVLSWSEL
QRLKPVAPSM GMMLETTATR LWSSPGGPHY GSPDKEPAVR LRVLDDAGRV NVPFTTGVLI
GIGETPVERV EALFAIRRAH REYGHLQEVI VQNFRAKPDT AMRGMPDATL HDLAATVAVT
RVLLGPQARV QAPPNLIAGE YDLLLRAGID DWGGVSPLTP DHVNPERPWP QLDELSRRTE
QAGFSLRERL TVYPEYVRAG DPWLDPRLLP HVGALADPAT GLARPTARPV GRPWQEPDEE
YGGRTDLHAT IDTTGRTADR RGDFDQVYGD WSMVADRVGA GATVGVGDHE LRAGLRLAAD
DPAALLEPGH TEAALALFAA DGPALDELCR IADEVRRDAV GDEVTYVVNR NINFTNVCYV
GCRFCAFAQR DRDADAYRLS VDQIADRAEQ AWLAGASEVC LQGGIDPRLP VTAYADLVRA
IKARVPGMHV HAFSPMEIVT AAGKAGVPIR EWLTGLREAG LDTIPGTAAE ILDDEVRWVL
TKGKLPTAAW VEVVTTAHEL GIRSSSTMMY GHVDHPAQWL THFRVLARTQ DRTGGFTEFV
ALPFVHTNAP IYLAGIARPG PTWRENRVVH AMSRLLLHGR VHNIQCSWVK LGDEGSAELL
RGGCNDLGGT LMEETISRMA GSGNGSARTE EQLIAIAAAA GRPARKRTTA YGHRAG
|
|---|
| |