| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0824 |
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| Symbol | ispH |
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| ID | 5704128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 919474 |
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| End bp | 920460 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641270342 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001535733 |
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| Protein GI | 159036480 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0665282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.186713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGG CTGAAGCGAC CCGGACCGGC AGCAAGCGTG TGCTCCTGGC GAAGCCACGC
GGCTACTGCG CGGGCGTTGA TCGGGCGGTG CAAACCGTCG AAGAGGCGCT CAAGCTCTAC
GGCGCGCCGA TCTACGTCCG CAAACAGATC GTGCACAACC GGCATGTGGT ACGGACGCTG
GAGGCCAAAG GCGCGATCTT CGTGGAGGAG AACGAGGAGG TGCCGGAGGG GGCGACCGTG
GTCTTCTCCG CGCACGGCGT GGCCCCCGAG GTTCACGAGC AGGCGCGGGC GCGCTCGCTG
AAGTCGATTG ACGCGACCTG TCCGCTGGTC ACCAAGGTGC ACCAGGAGGC GAAGCGGTTC
GCCGCGCAGG ACTACGACAT TCTGCTGATC GGCCACGAGG GGCATGAGGA GGTCGTTGGC
ACCTCTGGTG AGGCGCCCGA GCACATCCAA CTCGTCGATG GCCCGGAGGA CGCCGATCAG
GTCACCGTCC GGGATCCGGA CAAGGTGGTG TGGCTCTCCC AGACAACCCT GTCGGTGGAT
GAGACGCTGG AGACGGTGGC CCGGCTGAAG AAGCGGCTGC CGCTGCTCCA GTCGCCGCCG
AGCGACGACA TCTGTTACGC CACCAGTAAC CGGCAGCACG TCGTCAAGCA GATCGCACCG
GACTGTGACG TCATGATCGT GGTTGGCTCC ACGAACTCGT CGAACTCGGT GCGACTGGTC
GAGGTGGCCC TCGATGCGGG TGCGCGGGCA GGTCATCTCG TCGACTTCGC CCGTGAGATC
GACGACGCCT GGCTCGACGG TGCCCGCACG GTCGGTCTGA CCTCGGGCGC CAGCGTGCCC
GAGGAACTGG TCCAGGAGGT GCTCGCGCAC CTCGCGGCGC GCGGTTTCAC CGATGTCGAG
GAGGTGGTGA CCGCGGACGA GCGGCTGACC TTCTCGCTGC CGCAGGAGCT GAAGCGGGAC
ATGCGGGCTG CGGTGGCGCA CGGTTGA
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| Protein sequence | MSEAEATRTG SKRVLLAKPR GYCAGVDRAV QTVEEALKLY GAPIYVRKQI VHNRHVVRTL
EAKGAIFVEE NEEVPEGATV VFSAHGVAPE VHEQARARSL KSIDATCPLV TKVHQEAKRF
AAQDYDILLI GHEGHEEVVG TSGEAPEHIQ LVDGPEDADQ VTVRDPDKVV WLSQTTLSVD
ETLETVARLK KRLPLLQSPP SDDICYATSN RQHVVKQIAP DCDVMIVVGS TNSSNSVRLV
EVALDAGARA GHLVDFAREI DDAWLDGART VGLTSGASVP EELVQEVLAH LAARGFTDVE
EVVTADERLT FSLPQELKRD MRAAVAHG
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