| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0790 |
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| Symbol | |
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| ID | 5705033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 885439 |
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| End bp | 887064 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641270309 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001535700 |
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| Protein GI | 159036447 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.004165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00652278 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGAGC AGGGACGCGG CCGCTGGTGG GGGCTGTTCG CCATCAGCCT CGGAGTGGCC
ACGATCATCG TCGACGTGAC GATCGTCAAC GTCGCGGTTC CGGCGATCAT CGCCGACCTC
GGCGTCAGCT CCGCCGGGGC GCAGTGGGTC CAGGAGGCGT ACACCCTCGT TTTCGCGTCC
CTGCTCCTGG TCGTCGGCCG GGTCGCCGAC CGCACCGGGC GACGGCGAAT GTTCGTCGTC
GGCGTGCTGG TCTTCGTCGC CGCCAGCCTG CTCGCCGCGT CCGCCGGGTC TGGTGCGGAG
CTGATCGGGG CGCGGGTGCT CCAGGGACTC GGCGGCGCGA TGATGCTGCC CACCTCGTTG
TCCCTGCTCA ACGCGACCTT CGCCGGCCGA GAACGGGCGA TCGCGTTCGC GGTCTGGGGC
TCCACCATCG GCGGGTCCGC CGCTCTCGGC CCGCTCCTTG GCGGTTGGCT CACCACGGAG
CTCTCCTGGC GGTGGGCGTT CGGCATCAAC GTCCCGATCG GCGTGCTGGT CATCGCCGCC
ACGCTCGTGC TGGTCCCCGA GTCCCGGGAC GACCGTGTCG AGCGGGGCAT CGACCTGGTC
GGGGCGTTGC TGTCGGTGCT CGGCATGACC GGCATCGTCT TCGCCCTCAT CGAGGGGCGC
ACCTATGGCT GGTGGGAGTC AGCCACACCG ATCACCGTGT TCGGCCAGGA CTGGCCAGCC
ACGATCTCAC CGGTGCCGGT CGCTGGGATC GGCGGCCTGG CGGCCCTCGC GCTCCTCCTC
GCCCACCAGG TGCGCCGCAA CCGGCGCGGC CGACCGGCTC TGCTCGACCT CTCGTTGTTC
CGGATCGGCT CCTTCCGAAC CGGCGTCACC GCCGCCGGGA TCGTCAGCCT GGGTGAGTTC
GGTCTGCTCT TCGCCCTCCC GCTCTGGTAC CAGAACGTGC TCGGTTACAG CGCCTTTCAC
ACCGGCCTGG CGCTGCTGCC CCTCGCCGTC GGAAGCTTCT TGTCCAGCGC CCTCGGCGCG
TTGCTCGTCA AACGGTGGGG CGCCACGCGG GTGGTGCAGC TCGGAGTGGC GGCGGAGATC
GCCGGCATCG CCGGACTCGG CCTCGTCGTC GCCCCCGACA CCCGCTGGTG GGCGCCGCTC
GGCCTGCTCT TCGTCTACGG CGTCGGCGTC GGTCTGGCCA CCGCCCAGCT CACCGGGGTG
TCGCTGCGGG AGGTGCCGCT GCGGCGCAGC GGCCAGGGTT CCGGAGTGCA GAGCACCGCG
CGGCAGGTCG GATCCGCCCT CGGTATCGCC GTGCTCGGCA CGGTCCTCTT CGCCGGACTG
AGCGGCCTCC TCACCGCGCG GCTCGCTGAA CGCTCCGACA TCGAATCCAC CCAGCGGGAA
CAGATCGTGA CCACCGTTCG GGAGAGCGGC GGAGCGGCGA TCGCCGGGCT CGCCGCCGAC
CCACGCACCG CGCCGATCGC CGAGGACGCG AAGGCCGCCT TTGCCGATGC CACCCGGTAC
GCGGCCTTCG CCGCCGCCGG CTTCCTGCTC ATCGGCCTGA TCGCCTGTGC CCGGCTGCCC
CGGGACCGCC CCGAGCCAGT GGACCCGGCG CCGATGCCGC AGCCGGCGGC CAGCCCCGCC
AGCTAG
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| Protein sequence | MPEQGRGRWW GLFAISLGVA TIIVDVTIVN VAVPAIIADL GVSSAGAQWV QEAYTLVFAS
LLLVVGRVAD RTGRRRMFVV GVLVFVAASL LAASAGSGAE LIGARVLQGL GGAMMLPTSL
SLLNATFAGR ERAIAFAVWG STIGGSAALG PLLGGWLTTE LSWRWAFGIN VPIGVLVIAA
TLVLVPESRD DRVERGIDLV GALLSVLGMT GIVFALIEGR TYGWWESATP ITVFGQDWPA
TISPVPVAGI GGLAALALLL AHQVRRNRRG RPALLDLSLF RIGSFRTGVT AAGIVSLGEF
GLLFALPLWY QNVLGYSAFH TGLALLPLAV GSFLSSALGA LLVKRWGATR VVQLGVAAEI
AGIAGLGLVV APDTRWWAPL GLLFVYGVGV GLATAQLTGV SLREVPLRRS GQGSGVQSTA
RQVGSALGIA VLGTVLFAGL SGLLTARLAE RSDIESTQRE QIVTTVRESG GAAIAGLAAD
PRTAPIAEDA KAAFADATRY AAFAAAGFLL IGLIACARLP RDRPEPVDPA PMPQPAASPA
S
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