| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0788 |
|---|
| Symbol | |
|---|
| ID | 5705031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 884291 |
|---|
| End bp | 884920 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641270307 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001535698 |
|---|
| Protein GI | 159036445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.285865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00465255 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCA CACGTGGCTA CCATCACGGC GATCTTCGCC GGGCCCTGCT CGCCGCAGCC
GCGGAGGCGA TCGAGGAGTC CGGGGTCGCG GCGCTGAGCC TGCGGGACCT TGCCCGCCGG
GCTGGGGTGT CGCACGCGGC GCCCGCCCAT CACTTCGGCG ACAAGCCAGG ATTGCTCACC
GCGCTCGCGG TCGAGGGCTT CGACCAACTC GCCGAAGCCC TGAGTGGAGG CGACAGCCTG
CTGGAGATGG GGGTGGCCTA CGTGGACTTC GCCGTCCGGC GTCGGGCGCA CTTCGAGGTG
ATGTACCGAC CCGACCTCTA CCGCGCCGAC GCGCCGGAGG TGGTGGCGGC CCGAACGCGA
TCGCGTGCTG TCCTGCGTTC TGCGGTGGCT GACCTGCCGC CGGGACCTGG CGCGGTGGGC
GGCGCCGCCG GGGACGCGCT CGCCGCCTGG TCCATCGTGC ATGGCTTCGC CACACTGTGG
AATGCGGGCG CGCTGCCGGA CGAGGCAGGA GACGACCCGC GGGAGGCCGC CCGCGCCGTC
ATTCGTCGGT TGTTCGGATC CCGTGTGTCT GACGTCGCCG CGCGAGGCCG GGCGGCTCCT
CCGGCGCGGT CACCACGTAC TCCCGCATGA
|
|---|
| Protein sequence | MTGTRGYHHG DLRRALLAAA AEAIEESGVA ALSLRDLARR AGVSHAAPAH HFGDKPGLLT
ALAVEGFDQL AEALSGGDSL LEMGVAYVDF AVRRRAHFEV MYRPDLYRAD APEVVAARTR
SRAVLRSAVA DLPPGPGAVG GAAGDALAAW SIVHGFATLW NAGALPDEAG DDPREAARAV
IRRLFGSRVS DVAARGRAAP PARSPRTPA
|
|---|
| |