Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0778 |
Symbol | |
ID | 5707448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 871606 |
End bp | 872628 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641270297 |
Product | putative lipoprotein |
Protein accession | YP_001535688 |
Protein GI | 159036435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.557806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0374787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGGA TCGGAGCGGA CATGGATGGG TGTGGAGCGC GCCGCCGCGG CGCGGCGCTG GTGGCGGTAC TGATAGGGGT ACTGCTCGTC AGCGGCTGCG GTGCGGGGGG CGACAGTGGC GTCGGGTCTG GCACCGGCGA CGACGCGGCG TCGGCCGATG GGGCCCGGGC GGGAGCCGGC CAGCCAGCCG GCCAGCCAGC CGGGCAGGCC GAGGGCAGCG ACGCTACGGC GGACCTACGG GTCGACCAGC GTGCCATCGT CTACACCGGT TCGATGCGCG TGCAGGTGCC CGACGTCGAG CAGGCCGCCC GCGAGGCGAT CGCCCTGACC ACCGCGGCCG GCGGTTTCGT CGGTAGTGAC CAGCGACGCA GTGCGAACGG GAACGCCACC GTCGAACTGA CGCTCCGGGT ACCTGCCGCG AAGTTCACCA CGGTGGTGGA GCAGGTCGCC GAACTCGGCA AGCGGCAGCG ACAGGAGATC TCCACCGAGG ACGTCACCGA GGAGACGGTC GACCTGGACG CCCGGATCAC CACCCAACGG GCCCGGGTGG AGAACGCCCG GCGGCTGCTC GGCGAGGCGC AGTCGATCAG CGATCTGGTG TCGCTGGAGA ACGAGTTGGC GCGCCGCGAG GCCGACCTCG CCTCGCTGGA GGCGAAGAAG CGCCGGCTGG CGGACCTGAC CGCGCTCTCC TCGATCGCTG TGTCGCTGGT CGGGCCGGAC GCCGCCACCG AGGACGACGC TTCCGAGTTC GGCTTCGTGG TTGGTCTCCA GGGCGGGTGG AAGGTCTTCC TGCTCTCGTG GACCGTCCTG CTGACCGTGC TCGGAGCGGT GTTGCCGTGG CTGCTCCTTA TCGGCGTGCC GGTGGGGACG ATGGTGTGGT TGCTGCGCCG CCGGCGGCCG GCCCTGCCCG CTCCCCCCGC GCACGGCACC GGGACAGGGT CGACCGACGT CACCGGCGGC GGGGGCGCTC CGCCCGCGGT CAGCCCGCAG CCGCGAGCGC CTGGAGCGCG GTCTGCACCA TGA
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Protein sequence | MSRIGADMDG CGARRRGAAL VAVLIGVLLV SGCGAGGDSG VGSGTGDDAA SADGARAGAG QPAGQPAGQA EGSDATADLR VDQRAIVYTG SMRVQVPDVE QAAREAIALT TAAGGFVGSD QRRSANGNAT VELTLRVPAA KFTTVVEQVA ELGKRQRQEI STEDVTEETV DLDARITTQR ARVENARRLL GEAQSISDLV SLENELARRE ADLASLEAKK RRLADLTALS SIAVSLVGPD AATEDDASEF GFVVGLQGGW KVFLLSWTVL LTVLGAVLPW LLLIGVPVGT MVWLLRRRRP ALPAPPAHGT GTGSTDVTGG GGAPPAVSPQ PRAPGARSAP
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