| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0746 |
|---|
| Symbol | |
|---|
| ID | 5707778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 829986 |
|---|
| End bp | 831068 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641270265 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001535656 |
|---|
| Protein GI | 159036403 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000506865 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCTC GACTGTCCGA CATCGCCCAG CAGGCAGAGG TCAGCGAGGC CACCGTGTCG
CGGGTACTCA ACGACCGGCC CGGAGTGGCG CCCGAGACCC GGCAGGCTGT CCTGACCGCC
CTCGATGTGC TCGGTTACGA ACGACCGGCC CGGCTGCGCA AACGCTGCGC CGGCCTGGTG
GGCCTGGTGG TCCCGGAACT CGACAACCCG ATCTTTCCCG CATTCGCGCA GATCATCGAG
TCGGCGCTGG CGCCGACCGG CTTCACCCCG GTGCTGTGCA CCCAGACTCC CGGTGGAATC
CGGGAGGACG AATACGTCGA GATGCTGCTC GACCGGCAGG TCTCCGGCAT CGTCTTCGTC
TCTGGCCTGC ACGCTGACAC CACCGCCGAC CACGATCGAT ACCGTGCGCT GATAGCCCGC
CCGCTGCCGG TTGTCATGGT CAACGGGTAC GCACCCAATC TGCCAGCGCC CTTCATCTCC
TGCGACGACC GAGAGGCCGC CGACCTGGCC GTCACGCACC TGATCGCCCT GGGGCACCGG
CGGATCGGCC TGATCACCGG ACCGGACCGA TTCGTTCCGG TACAGCGCAA GGTCACCGGA
TACAAGGCTG CGATGAGGCG CGGCACCGAC GTGTCCGACG CCGAACTCAC CGAGCTGACC
GAGCTCTCCC TCTTTGGCGT CGAGGGCGGC GAGGCCGCCG CCACCCGCCT GCTGGAACGC
GGAGTCACCG GTCTGGTCTG CGGGTCCGAC CTCATGGCCC TGGGTGCCAT CCGCGCCGCC
CGGCAACGGG GGCTGTCCGT TCCCCGGGAC GTCTCCGTCG TCGGATACGA CGACTCCCCG
TTGATGGCCT TCACCGACCC GCCACTGACC ACCGTGCGCC AGCCGGTCCC GGCGATGGCG
GTTGCCGCCG TGCGGGCCCT GGTGGACGAG ATCAATGGGC ATGCCGCCCC GCACTCGGAG
TACCTGTTCC GGCCGGAGCT GGTGGTGCGC GGCTCGACCG CCGTCGCCCG GGCACCTGGC
GTCGGCGAGG GCGGCCCGGT ACAGCGGCAC ACCCCGTCGG CCACCCTGGC GGTCTCGGCC
TGA
|
|---|
| Protein sequence | MRARLSDIAQ QAEVSEATVS RVLNDRPGVA PETRQAVLTA LDVLGYERPA RLRKRCAGLV
GLVVPELDNP IFPAFAQIIE SALAPTGFTP VLCTQTPGGI REDEYVEMLL DRQVSGIVFV
SGLHADTTAD HDRYRALIAR PLPVVMVNGY APNLPAPFIS CDDREAADLA VTHLIALGHR
RIGLITGPDR FVPVQRKVTG YKAAMRRGTD VSDAELTELT ELSLFGVEGG EAAATRLLER
GVTGLVCGSD LMALGAIRAA RQRGLSVPRD VSVVGYDDSP LMAFTDPPLT TVRQPVPAMA
VAAVRALVDE INGHAAPHSE YLFRPELVVR GSTAVARAPG VGEGGPVQRH TPSATLAVSA
|
|---|
| |