Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0740 |
Symbol | |
ID | 5707772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 823812 |
End bp | 824741 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641270259 |
Product | CBS domain-containing protein |
Protein accession | YP_001535650 |
Protein GI | 159036397 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0817501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00625137 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGTCCGCG CCGCTGCCGC CGCCAGCCGC CTGGTGACGG GTCTGCTCGG CACCAGCCCG GTGGCCGGCC GAGAACGGAT CAGCGAGGAC GAACTGCGCG ACCTCGTCGC CGCGGCGACC GTGCTGGACC CGGTGGAACG GCGGATCATC GACGAGGTCC TCGTGGCTGG TGCGCGCCTG GTGCGCGAGG TGATGATGCC GCGGACCGAG GTGGTCTTCC TCTCCGCCGC GCTGACCGCC CCCGAGGCGG AACGCCTCGT CCGGGTCGAG ACGCATACCC GTTACCCAGT GGTCGACGGG ACTCACGACG ACGTGGTCGG CTTCGTGCAC CTACACGACG TGCTGCTCCG CCCCGACAAA GTCCCACCGG CCACCGTCGG CGAGCTGGCT CGGGAGGTCA AACGCGTGCC CGGGAGCAAA CGGGTGCTCG CGGCCCTGAC CGAGATGCGT CGGGAGGGGC ATCACCTGGC GGTGGTCATC GACGAGTACG GGGGGACCGC CGGAATCGTC ACCTGCGAGG ACCTGATCGA GGAGTTGGTC GGCGAGCTGC ACGGCGAGTA CGACACACTC GCGGAGCAGA CCAACGCCGG CCTGCCCACC ACCGTTGACG GCCGGCTGAA TCTGGCCGAC TTCGCCGAAC GTACGGGGGT GACCCTGCCG AGCGGGCCAT ACGAGACGGT CAGCGGTTTC GTCATGGCCG CGCTGGGCCG GCTGCCGGTG GCCGGCGACG AGGTGCCGGT GACTGCCGCG CCGGCCGCCC CGGCGGCCGC GGCGGGGCAG TCGCCCAGCG GCTGGCTGCT GCGGGTGCTG GCGCTGGAGG GGCGTCGGGT GGCACGGGTG ACGGTCACCG TGGTGCGGCC ACCCGAGCCG CGGCGCGAAC TGGGTCTCCC TGTGCGACCG GCCCGCGGTC GACCCGCCGG CCCGTCATGA
|
Protein sequence | MVRAAAAASR LVTGLLGTSP VAGRERISED ELRDLVAAAT VLDPVERRII DEVLVAGARL VREVMMPRTE VVFLSAALTA PEAERLVRVE THTRYPVVDG THDDVVGFVH LHDVLLRPDK VPPATVGELA REVKRVPGSK RVLAALTEMR REGHHLAVVI DEYGGTAGIV TCEDLIEELV GELHGEYDTL AEQTNAGLPT TVDGRLNLAD FAERTGVTLP SGPYETVSGF VMAALGRLPV AGDEVPVTAA PAAPAAAAGQ SPSGWLLRVL ALEGRRVARV TVTVVRPPEP RRELGLPVRP ARGRPAGPS
|
| |