Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0735 |
Symbol | |
ID | 5704508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 818747 |
End bp | 819337 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641270254 |
Product | aminoacyl-tRNA hydrolase |
Protein accession | YP_001535645 |
Protein GI | 159036392 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0068065 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGCGGAGG AGACAGGGCC GTGGTTGGTG GTTGGCCTGG GCAACCCCGG TCGGGAGTAC GCCGGTAACC GGCACAATGT GGGGTTTCTG GTGGCCGACC TGCTGGCCGA GCGGCTGGGC GCACGGTTCG GTCGCCACAA GCGGGCGGTG GCGGAGGTCG CCGAGGGACG GTTGGGGTTT GGCGGCCCGC GGCTGGTGCT GGTGAAACCG TTGACGTACA TGAACCTGTC CGGGTCAGCG GTGGCCGGCC TGGCACAGTT CTACAAGGTT CCGCCGGCGC GGGTCGTGGC CGTGCACGAC GAGCTGGACA TTCCGTACGG CCAGGTGCGG TTGAAGTGCG GTGGCGGCGA GGGCGGCCAC AACGGCGTGC GGTCGATGAC GAAGTCGCTG GGGACGAAGG AGTACGTCCG GGTGCGGTTC GGGGTCGGTC GGCCACCGGC ACGGCGGGAC CCGGCTGACT TCGTACTGTC GGATTTCGGT ACCGTCGAGC GCAAGGAGCT GGATTTCCTG GTGGACCGGG CGGCTGATGT GGTGGAGTCG ATCGTCCTGC GTGGGGTCGA ACCGACCCAG AACCTCTATC ACGGCGCCTG A
|
Protein sequence | MAEETGPWLV VGLGNPGREY AGNRHNVGFL VADLLAERLG ARFGRHKRAV AEVAEGRLGF GGPRLVLVKP LTYMNLSGSA VAGLAQFYKV PPARVVAVHD ELDIPYGQVR LKCGGGEGGH NGVRSMTKSL GTKEYVRVRF GVGRPPARRD PADFVLSDFG TVERKELDFL VDRAADVVES IVLRGVEPTQ NLYHGA
|
| |