Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0731 |
Symbol | |
ID | 5704503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 813920 |
End bp | 814603 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641270249 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001535641 |
Protein GI | 159036388 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00250469 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGACA GCCTGGGCAG CGACCCGATC ACCGGTCGTC GGCGGGGAGT CGCAGCAGCC GGCAAGACCT CACGGGTACG CATGTCGGCC GCGCAGCGGC GCGAACAGCT CATCTCGATC GCGCGACAGA TCTTCGCCGA ACGCGGATTC GACGCCACCT CGATCGAGGA GGTGGCGTCC CGGGCCAAGG TGTCCAAACC GGTGGTGTAC GAGCACTTCG GCGGCAAGGA AGGGCTGTAC GCGGTGGTCG TGGACCGGGA AGTCCGCAGC CTGCTGGACC GGATCACCAC CGCGCTGACG GCCGGACACC CACGGGAACT GCTCGAGCAG GCCGCCCTGA CCCTGCTCAC CTACATCGAG GAGGAGACCA GCGGGTTCCG GGTACTGGTC CGCGAGTCAC CGCTGATGTC GGCGACGGGC AACTTCAGCA GTGTCATGAA CGACGTCGCA CATCAGGTCG AGCACATCCT GGGTGCCGAG TTCTCCAGCC GGGGGTACGA CCCGAAGCTG GCCGAACTCT ACGCCCAGGC CCTGGTGGGG ATGGTGGCGC TGACCGGCCG CTGGTGGCTG GAGGTGCGCA GGCCACCCAA GGAGACAGTG GCGGCGCACC TGGTGAACCT GGCCTGGAAC GGCCTGTCAC ACCTCGAGGC CAAGCCAGGT CTGATCACCC TACGGGGACG CTGA
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Protein sequence | MTDSLGSDPI TGRRRGVAAA GKTSRVRMSA AQRREQLISI ARQIFAERGF DATSIEEVAS RAKVSKPVVY EHFGGKEGLY AVVVDREVRS LLDRITTALT AGHPRELLEQ AALTLLTYIE EETSGFRVLV RESPLMSATG NFSSVMNDVA HQVEHILGAE FSSRGYDPKL AELYAQALVG MVALTGRWWL EVRRPPKETV AAHLVNLAWN GLSHLEAKPG LITLRGR
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