Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0728 |
Symbol | |
ID | 5704500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 810804 |
End bp | 812600 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641270246 |
Product | ABC transporter related |
Protein accession | YP_001535638 |
Protein GI | 159036385 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000999119 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGCCAACA TCGTCAACCT GGACCGGGTA TCCAAGGGCT ACGGTGCTGC CGGGGCACTG CTCACCGACG TCTCGCTCGG TCTCGACGAC GCCGACCGGG TCGGCGTGGT GGGCCTCAAC GGCGCCGGCA AGTCCACCCT GCTGCGCCTG ATCGCGCGGC AGGAAGAGCC GGACGAAGGT CGGGTGACCC ACCGCCGTGA CCTGCGCGTC GCCGGGCTGC CACAGACCCT CCGACTGGCC CCCGACGCCA CCGTCCGCGA CGTCGTCCTC GGCACCGCGT GGCTGGCCGA GAGTATGGGC GCAGAACACG AGTGGGCCGG TGATGCCGGG GTCCGCGGCG TCCTCGACGG GCTCGGGATG CCGTACCTCG GCCTCGACAC ACCGGTCGGC CCGATGTCCG GCGGCGAGCG CCGGCGGGTC GCCCTGGCCG CGCTGCTGGT CCGCGACTCC GATCTGCTGA TCCTCGACGA GCCCACCAAC CACCTCGACG TCGGCGGCAT CGACTGGCTG GCCCGGCACC TGCTCGCCCG TCGGGGTGCG CTCGTCGTGG TCACCCACGA CCGGTGGTTC CTCGATGCTG TCTGCACCAC CACCTGGGAG GTCGCCGACC AGACCGTCCG GGCGTACGAG GGCGGCTTCG CGGCCTGGAC CCTCGCCCGT GCCGAACGGG AGCGGGTCGC TGCCGCCACC GAGGCTCGCC GGCAGAATCT GCTTCGCAAG GAGATCGCCT GGCTGCGGCG CGGCGCCCCG GCCCGCACCG CCAAGCCGAA GTTCCGTATC GACGCGGCGA ACGCGCTGAT CGCTGACGTG CCGCCGCCGC GCGACACACT GTCGTTGCAG CGGCTCGCCA CCGCCCGGCT CGGCAGGCAG GTGTACGACC TGGAACACGT ACGCCTGGAC GCGGGGCCGA AGGAGATCCT GCACGACCTC ACCTGGCAGG TCGGTCCCGG TGACCGGATC GCCATTCTTG GCCGCAACGG CGCCGGAAAG ACCACGTTGC TGCGAATGCT CGCCGGCGTC ACCCGACCGG ACGGTGGCCG GTTCGCGACC GGTTCCACCG TGCGCCCCGC ATTTCTCTCC CAGGAACTCG TCGAGCTCCC CGGCCACCTG CGCGTCCTCG AGGCCGTTGA GGAGGTCGCC CGCCGCGTTC AGCTCGGTGA CCGGGAGATC TCCGCCGCCC AGCTCGCCGA GGTCTTCGGC TTCGACGACC GCCGGCTCTG GACGCCGGTG GCAGACCTCT CCGGCGGGGA GCGGCGGCGC CTGCAACTGC TGCGGTTGCT CGCCGGGGAG CCGAACGTGC TGTTGCTCGA CGAGCCCACC AACGACCTGG ACACCGACAC TCTCGCGGCG CTCGAGGACC TGCTCGACTC GTGGCCCGGG GTGATCGTCG TGGCCAGCCA TGACCGGTAC CTCGTGGAGC GGGTCACCGA CACCGCGTAC GGCATGTTCG GTGACGGCCA GCTGGTGCAC CTGCCCGGCG GCGTCGACGA GTACCTCGCC CGTGCCTCCG AGGGCGTTCG CCCCGTGCCG GTGGCTGGCG GTGGGCAGGG GTCCGCGTCG GCGAGCGGGA TGTCCGCCGC GCAGGTGCGC CAGGCCCGTA AGGAGCTGGC GCGGCTCGAG CGGCAGGTCG GCAGGCTGGA GCAGCGGGAG GCGGACCTGC TCGACCGGCT GGCCACGCAC GCCACCGACT ATGCGACCGT CGCTGATCTC GACGCCCAGC TCAAGGACGT CCGGGCCGAG CGTGAGCAGG TCGAGGAGGC GTGGCTGACG CTCGCCGACC AGCTCCCGAC TGGTTGA
|
Protein sequence | MANIVNLDRV SKGYGAAGAL LTDVSLGLDD ADRVGVVGLN GAGKSTLLRL IARQEEPDEG RVTHRRDLRV AGLPQTLRLA PDATVRDVVL GTAWLAESMG AEHEWAGDAG VRGVLDGLGM PYLGLDTPVG PMSGGERRRV ALAALLVRDS DLLILDEPTN HLDVGGIDWL ARHLLARRGA LVVVTHDRWF LDAVCTTTWE VADQTVRAYE GGFAAWTLAR AERERVAAAT EARRQNLLRK EIAWLRRGAP ARTAKPKFRI DAANALIADV PPPRDTLSLQ RLATARLGRQ VYDLEHVRLD AGPKEILHDL TWQVGPGDRI AILGRNGAGK TTLLRMLAGV TRPDGGRFAT GSTVRPAFLS QELVELPGHL RVLEAVEEVA RRVQLGDREI SAAQLAEVFG FDDRRLWTPV ADLSGGERRR LQLLRLLAGE PNVLLLDEPT NDLDTDTLAA LEDLLDSWPG VIVVASHDRY LVERVTDTAY GMFGDGQLVH LPGGVDEYLA RASEGVRPVP VAGGGQGSAS ASGMSAAQVR QARKELARLE RQVGRLEQRE ADLLDRLATH ATDYATVADL DAQLKDVRAE REQVEEAWLT LADQLPTG
|
| |