| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0726 |
|---|
| Symbol | ksgA |
|---|
| ID | 5704531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 808782 |
|---|
| End bp | 809651 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641270244 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001535636 |
|---|
| Protein GI | 159036383 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.810967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00072705 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGTC TCCTCGGCCC GGCGGAGATC CGGGACCTCG CCGCCCGCCT CGGCGTGGCT
CCCACCAAGC GGCTCGGCCA GAATTTCGTG CACGACCCCA ACACGGTACG GCGGATCGTC
ACCACCGCCG GTCTGGCCTC GAACGACGTG GTGCTGGAGG TCGGGCCGGG CCTCGGCTCG
CTCACCCTCG CCCTGCTGCC GGTCGCCGCG CACGTGCACG CCGTCGAGAT CGACCCCGTC
CTCGCTGCCG CGCTACCGGA GACCGCGGTC CGGCACGCCG GCCCCGCCGC CGCGCGGCTC
TCCGTGCACC GGGCCGACGC GCTCCGGGTC ACCGCCGGGC AGCTCGCCGA TCCCGCGCCG
ACCGCGTTGG TCGCCAACCT GCCGTACAAC GTCGCGGTGC CGGTGGTGCT GCACCTGCTC
GCCGAACTGC CCACGCTGCG GCACGGCCTG GTCATGGTGC AGAAGGAGGT CGCCGATCGG
CTCGTCGCCG GTCCCGGCTC CCGCGTGTAC GGCGTACCTT CGGTCAAACT TGCCTGGTAT
GCCCGAGTTC GCGCGGCCGG GAGGGTCCCG CCGAACGTGT TCTGGCCGGT GCCGAACGTC
GACTCCGGAC TGGTCGCCTT CACCCGCCGG GAGCCGCCGG GCGCCGGTGG CTCCCGGAGC
CGGGTCTTCG CGGTCGTGGA CGCCGCGTTC GCCCAGCGCC GCAAGACCCT TCGCGCGGCC
CTGGCGGGCT GGGCCGGCGG CGGTGACCGG GCCGCCGCGG TACTCACCGC GGCCGGAGTG
GATCCGGGAG CCCGTGGGGA GTCACTCACC GTCGAGCAGT TCGCCGCCAT CGCCGCGTCG
GCCCCGGCCA TCACCCGGGA CGGGCAGTAG
|
|---|
| Protein sequence | MTGLLGPAEI RDLAARLGVA PTKRLGQNFV HDPNTVRRIV TTAGLASNDV VLEVGPGLGS
LTLALLPVAA HVHAVEIDPV LAAALPETAV RHAGPAAARL SVHRADALRV TAGQLADPAP
TALVANLPYN VAVPVVLHLL AELPTLRHGL VMVQKEVADR LVAGPGSRVY GVPSVKLAWY
ARVRAAGRVP PNVFWPVPNV DSGLVAFTRR EPPGAGGSRS RVFAVVDAAF AQRRKTLRAA
LAGWAGGGDR AAAVLTAAGV DPGARGESLT VEQFAAIAAS APAITRDGQ
|
|---|
| |