Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0706 |
Symbol | |
ID | 5707910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 784979 |
End bp | 785647 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641270224 |
Product | lipase class 2 |
Protein accession | YP_001535616 |
Protein GI | 159036363 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.103882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00190936 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGACGCT TCATCCGCAC CGCCATCGTC GCCACACTGG TAGCCACAGC GTCACTGGTC GCCCCGTCGT CCGCAGCCGC CGCGGCCCGA AACCCCGTCG TCTTCGTCCA CGGACTGAGC AGCTCTGCCA GTACCTGGAA CGCCTGGATC GGCAAGTTCA AGGCGGACGG CTACCAGAGC TCCGAGCTCC ACACCTGGTC CTACGACTGG AAACAGTCCA ACGCGACCAC CGCCGCGAAA CTACAGACCA AGGTGCAGGA GGTGCTCGCC GCGACCGGCG CCACCAAGGT CGACATCGTT GCCCACTCCA TGGGAGCCCT CAGCTCCCGC TGGTACATAA AGAACTACGG TGGGACGGCC ACCGTGGACG ACTTCGTTTC CGTGGCCGGC GTCAACCACG GAACCGACGT CGCCGTATTC TGCTCTTTCT ACAAATCATG CAGGGAAATG CTATTGGGCA GCAGCTTTCT CGACTCCCTG AACTCCGGAG ACGAGACCCC GGGAAGCCTA AGCTACGCCA CCCTCTGGTC CACCTGCGAT GCGCTGATCA ACCCCGACAG TTCAGCAAAA CTCGATGGTG CGGTAAACAC CTCCGTGGGC TGCAAGGGCC ACACTGACAT GAACGACGAC TCCAGTAACT ACACGAAGGT CCGGGACTTC ATCGCCTGA
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Protein sequence | MRRFIRTAIV ATLVATASLV APSSAAAAAR NPVVFVHGLS SSASTWNAWI GKFKADGYQS SELHTWSYDW KQSNATTAAK LQTKVQEVLA ATGATKVDIV AHSMGALSSR WYIKNYGGTA TVDDFVSVAG VNHGTDVAVF CSFYKSCREM LLGSSFLDSL NSGDETPGSL SYATLWSTCD ALINPDSSAK LDGAVNTSVG CKGHTDMNDD SSNYTKVRDF IA
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