Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0649 |
Symbol | |
ID | 5707848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 731024 |
End bp | 731893 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641270169 |
Product | dihydropteroate synthase |
Protein accession | YP_001535562 |
Protein GI | 159036309 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.163366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00244455 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGGACT CGCTGCGGCT CGGCAGGCGA ACCTTCGGCC CTGGCGAACT GGGAATCATG GCGATCATCA ACCGCACACC GGACTCGTTC TTCGACCGCG GCGCGACCTT CGGGCAGGAC AGCGCGCTGC GCGCGGTGGA ACGCGCGGTC GACGAGGGCG CCGACATCAT CGACATCGGC GGGGTCAAGG CCGGCCCCGG CGCGGAGGTC GACCCGGCCG AGGAGATCCG CCGCACCGTG GCCACCATCG CCGCGGTCCG GTCCGCCTTC CCCGACGTGG TCATCTCGAT CGACACCTGG CGGGCCGAGG TGGCCGTGGC GGCGGTCGCC GCCGGCGCGG ATCTGCTGAA CGACACCTGG TCCGGTACCG ACCCGGCACT GGCTCGAGTC GCGGCGGAGA CCGGCGCCGG GCTGGTCTGT TCACACGCGG GCGGGTTGGC CCCGCGGACC CGGCCGCACC GGGTGGCCTA CGACGACGTG ATGGCCGACG TCGTAGCGAC CGTCACCCGC CTCGCCGATC GCGCGGTGTC CTTGGGGGTA CGACGCGACG GCATCCTCAT CGACCCAGCC CACGACTTCG GTAAGAACAC CCGCCACTCC TTGGAGATCA CCCGCCGCCT CGACGAACTC ACCGGTACTG GTTGGCCGCT GCTGGTCGCC CTGTCGAACA AGGACTTCAT CGGCGAGACC CTGGACCTGC CGGCCGTCGA GCGGTTGGAG GGGACTCTCG CCGCCACCGC GATCTCAGCC TGGCTGGGCG CCCGGGTGTT CCGAGCGCAC CAGGTCCGAG CGACCCGCCG GGTCCTGGAC ATGGTGGCCG CTATCCGCGG CGACCGCCCA CCCGCGTTGA CCCGGCGTGG CCTGGCGTGA
|
Protein sequence | MADSLRLGRR TFGPGELGIM AIINRTPDSF FDRGATFGQD SALRAVERAV DEGADIIDIG GVKAGPGAEV DPAEEIRRTV ATIAAVRSAF PDVVISIDTW RAEVAVAAVA AGADLLNDTW SGTDPALARV AAETGAGLVC SHAGGLAPRT RPHRVAYDDV MADVVATVTR LADRAVSLGV RRDGILIDPA HDFGKNTRHS LEITRRLDEL TGTGWPLLVA LSNKDFIGET LDLPAVERLE GTLAATAISA WLGARVFRAH QVRATRRVLD MVAAIRGDRP PALTRRGLA
|
| |