Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0646 |
Symbol | |
ID | 5707845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 727233 |
End bp | 729080 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641270166 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
Protein accession | YP_001535559 |
Protein GI | 159036306 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.478699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000910041 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACGAAGA AGATCCGTCA GCTTGACCGC GTGGTCATCC GCTTCGCCGG TGACTCCGGC GACGGCATGC AGCTCACCGG CGACCGATTC ACCTCCGAAA CCGCCCAGCT CGGCAACGAC ATCTCCACGC TGCCCAACTT CCCGGCGGAG ATCCGCGCGC CCGCCGGGAC GCTACCCGGC GTGTCGAGCT TCCAGGTGCA CTTCGCCGAC TACGACATCC TGACTCCCGG CGACTCGCCG AACGTTCTGG TCGCGATGAA CCCCGCCGCA CTCAAGGCGA ACCTCGCCGA CCTGCCGCGT GGAGCTGACA TCATCGTCAA CACCGACGAG TTCACCCGGC GCAACCTGGC CAAGGTCGGC TACCAGGTCA ACCCGCTCGA GGACGACTCA CTCGCCGGCT ACACGCTGCA CCCCGTGGCG TTGACCTCGA TGACCGTGGG CGCGCTCGCC GAACACGCGG TGTCCAAGAA AGACGCCGAA CGAGCCAAGA ACATGTTCGC GCTGGGTCTA CTGAGCTGGA TGTACTCCCG ACCGTACGAA TCCACACTGC GATTCCTGGA ACGTAAGTTC GCGGCCCGGC CGGAACTGGT CGCGGCCAAC GTCGCGGCGT TCAAAGCTGG CTGGAACTTC GGCGAGACGA CCGAGGACTT CGCGGTCCGG TACGAGATCA AACCGGCGAG GATGCACCCC GGTACCTATC GGAACATCAC CGGCAACATG GCGCTGTCAC TCGGCCTGGT GGCCGCCGGG GTCCGCGCCG ATCTGCTGGT CTTCCTCGGC GCCTACCCGA TCACCCCCGC CTCGGACATC CTGCACGAAC TGAGCAAGCA CAAGCGTTTC GGCGTGCTCA CCATGCAGGC CGAGGACGAG ATCGCGGCGA TCGGCGCGGC GCTGGGCGCC TCGTACGGCG GAGCGCTCGG CGTCACCACC ACCAGTGGCC CCGGCGTCGC ACTCAAGAGC GAAACCATCT CCCTCGCGGT GGCCCTGGAA CTTCCGCTGG TCATCGTGGA CGTGCAGCGG GCCGGACCAT CGACCGGCAT GCCGACCAAG ACCGAGCAGG CCGACCTGAA CATGGCCCTC TACGGCCGGC ACGGTGAGGC ACCGGTAGCG GTACTCGCGC CGAAGTCCCC GGCAGACTGC TTCCATGCGG CGCTGGAGGC GGCACGGATC GCGCTGACCT ACCGCACACC GGTGCTCCTG CTGTCCGACA ACTACGTCGC CAACGGCTCC GAGCCCTGGC TGCTCCCCGA GATCGAGTCC CTGCCCGACC TCCGGGTCGA GTTCGCCACC CGACCCAACG GCGAGGACGG CGCCACCTTC CTGCCGTACC TGCGGGACCC GGAGACCCTG GCCCGGCCCT GGGCGGTCCC GGGTACACCG GGCCTGGAGC ACCGAATCGG GGGGCTGGAG AAGGCCGACA AGACCGGCGA CATCTCGTAC GACCCGGCCA ACCACGACCT CATGGTGCGG ACCCGCGCCG CCCGCATCGA GGCGATCCCC GTCCCCGACG TCGAGGTCGA GGACCCGGAC GGTGACGCCC GGGTGCTGGT GCTCGGTTGG GGATCGACGT ACGGGCCGAT CGGCGCAGCC TGCCGCGGCC TGCGCCAACG CGGGCTCGCC ATCGCCCAGG CACACCTGCG GCACCTCGTC CCGATGCCGG CGAACCTCGG CGAGGTGCTG CGTTCCTACG AGCGGGTGGT CATCCCCGAG ATGAACCTCG GTCAGCTCGC CCACGTGATC CGCGCCCGGT ACCTGGTCGA CGCGATCAGC TACAACCAGG TTCACGGCCT GCCGTTCACC GCCAACGAGC TGGAGACGAT GCTGGAAGAG GTCCTGAAGA ATGTCTGA
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Protein sequence | MTKKIRQLDR VVIRFAGDSG DGMQLTGDRF TSETAQLGND ISTLPNFPAE IRAPAGTLPG VSSFQVHFAD YDILTPGDSP NVLVAMNPAA LKANLADLPR GADIIVNTDE FTRRNLAKVG YQVNPLEDDS LAGYTLHPVA LTSMTVGALA EHAVSKKDAE RAKNMFALGL LSWMYSRPYE STLRFLERKF AARPELVAAN VAAFKAGWNF GETTEDFAVR YEIKPARMHP GTYRNITGNM ALSLGLVAAG VRADLLVFLG AYPITPASDI LHELSKHKRF GVLTMQAEDE IAAIGAALGA SYGGALGVTT TSGPGVALKS ETISLAVALE LPLVIVDVQR AGPSTGMPTK TEQADLNMAL YGRHGEAPVA VLAPKSPADC FHAALEAARI ALTYRTPVLL LSDNYVANGS EPWLLPEIES LPDLRVEFAT RPNGEDGATF LPYLRDPETL ARPWAVPGTP GLEHRIGGLE KADKTGDISY DPANHDLMVR TRAARIEAIP VPDVEVEDPD GDARVLVLGW GSTYGPIGAA CRGLRQRGLA IAQAHLRHLV PMPANLGEVL RSYERVVIPE MNLGQLAHVI RARYLVDAIS YNQVHGLPFT ANELETMLEE VLKNV
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