Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0636 |
Symbol | |
ID | 5708000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 716685 |
End bp | 718475 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641270157 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_001535550 |
Protein GI | 159036297 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.252902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGAGA TCAGTGACTA TGCGTTTCTC GGCGACTGCC AGGGCGCGGC GTTGGTGTCG TCGGACGGGT CCGTGGACTG GTGGTGCCCG CCGCGGTTCG ACGCGCCGAG TGTCTTCGCG CGTCTGCTCG GATCCGCGGG CGGCCACTGG ACGATTCGCC CGCGCGGGGA GTACACGACG TCACGCCGCT ATCTCGACGG GACGATGGTC GTGCAGACCG AGTTCCACAC CCAGGACGGG GTGCTGCGGC TGACGGATGC CCTCAGCCTT GGAGTCGGGG AGCGCGGTCA CGGGATCGGT CTCACCTCCC CGCACGTCCT CCTGCGCCGG GTCGAAGCGG TCGTCGGCAC GGCGCAGGTG ACGGTCGAGG TCGCGGCCCG GCCGGAGTAC GGCCTGGTCA GCCCCACCGT TGCCGACGCC ACGACGGGGA TCGAGATCTC CGGAGGCGCC GACCGACTGA CCCTCACCGG CGACCGTGAT CTGACCATCG ACGGTTCACT GGTGACCGGA GAATTCACCC TGGCCGAGGG TGACAGCGCG GTGTTCGCGC TGCACCACCG ACGGGCTGCC GATCCACCGA CGGTTCCTCT CGACGGGCGT GCGGCGCTGC GGGACACCAT CGCCGCCTGG CAGTCATGGG ACCGTATCCA CCAGGGATAC CAGGGACCCT ACCGGGAGCA GGTCCGCCGC AGCGCCCTCG TCCTCCAGGC GTTGACCTAC CAGCCGACCG GAGCCGTGAT CGCCGCTGCC ACCACATCCC TGCCCGAGGA GGTCGGCGGC GAGGCGAACT GGGACTATCG ATTCGGCTGG CTCCGCGACG GCGCCTTCAC CCTGAAGGCA CTCTGGGTCG CCGCATGCCC GGACGAAGCA CACCGGTTCT TCGACTGGAT GGCCGAGTCG GTGGGCTCGG TGGACGCGGA GGACCATGTC CCGATCATGT TCGGTGCGGC TGGTGAGCGT GACCTCACCG AGCACACCCT CGAGCACCTT GAGGGATACC GCGACAGCCG CCCGGTACGG ATCGGCAACG ATGCCTGGCG GCAGAAGCAA CTCGACGTCA TCGGCGAGGT CCTCGAGTGC GCCTGGGTCC TGCGGGAGCA GCTCACCGAC CTGTCGCCCG CCGCCGCCGG CCTGCTGCGG TCCCTGGCCG ACCGGGCTGT GGACACCTGG CAGGAGCCGG ACGCCGGTAT CTGGGAAGGC CGCGAGGGCC AGCGGCACTA CCTGACCTCG AAGGTGATGT GCTGGCTGGC CCTCGACCGG GCCGTCAAAC TGGCACAGCT CCTGGACGCC GAGGCGAAGG TCCCGCAGTG GTCGGAGGCG ATGACCCAGG TCCGCGCGGC GATCCTCACC GAGGGGTGGA GTACCTCGAG CAAGGCGTTC ACCGGCGCGT TCGGCTCCGA CCACCTGGAC GCGGGGGTCC TGGTCATGCC CATCCTCGGG TTCCTCCCCG CCGACGACGA GCGAGTACTT GCCACAGTGG ATGCCATCGA ACGAGACCTG GTCCAGGCCG GCCTCGTGCA ACGCTGGACC AGGGCAGGTG ACGAGGGCGC CTTCATCATC TGCTCGTACT GGTTGGTCCA GGCCCTCGCC CTGGCCGGGC GCATCGATCA GGCTCGGCAG GTCTTCGACA CCGTCACCGC ACGGGCGAAC GACCTCGGCC TGCTCGCCGA GGAGATCGAC CGACGCGAGG GCAGCCTGAT CGGAAACTTC CCCCAGGCGT TGTCCCACAT CGGCCTGATC AACGCCGCGT GGACCATCGG CCAGGTCGAG GCCGCAGCAA CCAGATCGTA G
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Protein sequence | MAEISDYAFL GDCQGAALVS SDGSVDWWCP PRFDAPSVFA RLLGSAGGHW TIRPRGEYTT SRRYLDGTMV VQTEFHTQDG VLRLTDALSL GVGERGHGIG LTSPHVLLRR VEAVVGTAQV TVEVAARPEY GLVSPTVADA TTGIEISGGA DRLTLTGDRD LTIDGSLVTG EFTLAEGDSA VFALHHRRAA DPPTVPLDGR AALRDTIAAW QSWDRIHQGY QGPYREQVRR SALVLQALTY QPTGAVIAAA TTSLPEEVGG EANWDYRFGW LRDGAFTLKA LWVAACPDEA HRFFDWMAES VGSVDAEDHV PIMFGAAGER DLTEHTLEHL EGYRDSRPVR IGNDAWRQKQ LDVIGEVLEC AWVLREQLTD LSPAAAGLLR SLADRAVDTW QEPDAGIWEG REGQRHYLTS KVMCWLALDR AVKLAQLLDA EAKVPQWSEA MTQVRAAILT EGWSTSSKAF TGAFGSDHLD AGVLVMPILG FLPADDERVL ATVDAIERDL VQAGLVQRWT RAGDEGAFII CSYWLVQALA LAGRIDQARQ VFDTVTARAN DLGLLAEEID RREGSLIGNF PQALSHIGLI NAAWTIGQVE AAATRS
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