Gene Sare_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0621 
Symbol 
ID5707128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp702358 
End bp703098 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID641270144 
ProductABC transporter related 
Protein accessionYP_001535537 
Protein GI159036284 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.958584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.980042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG TTGTGCTTGA TGAAGTAGCC CAAAAATTTA GGGGTGGGTT CCACCTCGGT 
CCCGTCAGCC TCAACCTGAC AGTTGGAGTC ACTTGCCTAT TAGGGGCGAA CGGGTCAGGT
AAGACAACGC TGTTGCGGAT GCTATCCGGA ATCGATAGCC CAGCTAAGGG AACCATCCAA
ATAGGCAAGG AAGGCAAACC CGGAGAGGCT AAATCTATCG GCTTCCTACC CCAGGATTTT
ACCGCGCCGA AAAACGCTAC TTGCCAGGAC TTTCTCCACT ATGTCGCCTG GTCACGACGG
GTCTCGGCCA AGAGTCGCGA AACGCTGATC CAATCAGCGC TCTCGCGTAC CGGGCTTTCG
GACCAAGCCG AAGAGCGGAT CGGAAATATT TCCGGTGGAA TGCTCCGGCG ACTGGGAATC
GCTCAGGCGC TAGTCCATGA ACCAAGTTTT TTGATCTTGG ATGAGCCAAC TGTGGGGCTC
GATCCTGGGC AACGCCTCCG GATCCGCGAC CAGGTTCGCA AGTTGGCGAC CGATGTCGCA
GTCCTGTACT CGACGCATTT GGTCGAGGAC GTTCGTTCGT TAGCTGACCA AATTATCATA
CTTCGCAGTG GAAAGGTAGC ATTTAAGGGC ACCCTGGCTG AGGTTGAGCA GTCAGCCGAG
GAAGGCGCCC CAATAGATCA GCCAGGTGCT CCAACTCGAC TAGAGCGGGG AATAAGCATG
TTTATGGATG AGGTCGAATG A
 
Protein sequence
MTEVVLDEVA QKFRGGFHLG PVSLNLTVGV TCLLGANGSG KTTLLRMLSG IDSPAKGTIQ 
IGKEGKPGEA KSIGFLPQDF TAPKNATCQD FLHYVAWSRR VSAKSRETLI QSALSRTGLS
DQAEERIGNI SGGMLRRLGI AQALVHEPSF LILDEPTVGL DPGQRLRIRD QVRKLATDVA
VLYSTHLVED VRSLADQIII LRSGKVAFKG TLAEVEQSAE EGAPIDQPGA PTRLERGISM
FMDEVE