Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0621 |
Symbol | |
ID | 5707128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 702358 |
End bp | 703098 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641270144 |
Product | ABC transporter related |
Protein accession | YP_001535537 |
Protein GI | 159036284 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.958584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.980042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG TTGTGCTTGA TGAAGTAGCC CAAAAATTTA GGGGTGGGTT CCACCTCGGT CCCGTCAGCC TCAACCTGAC AGTTGGAGTC ACTTGCCTAT TAGGGGCGAA CGGGTCAGGT AAGACAACGC TGTTGCGGAT GCTATCCGGA ATCGATAGCC CAGCTAAGGG AACCATCCAA ATAGGCAAGG AAGGCAAACC CGGAGAGGCT AAATCTATCG GCTTCCTACC CCAGGATTTT ACCGCGCCGA AAAACGCTAC TTGCCAGGAC TTTCTCCACT ATGTCGCCTG GTCACGACGG GTCTCGGCCA AGAGTCGCGA AACGCTGATC CAATCAGCGC TCTCGCGTAC CGGGCTTTCG GACCAAGCCG AAGAGCGGAT CGGAAATATT TCCGGTGGAA TGCTCCGGCG ACTGGGAATC GCTCAGGCGC TAGTCCATGA ACCAAGTTTT TTGATCTTGG ATGAGCCAAC TGTGGGGCTC GATCCTGGGC AACGCCTCCG GATCCGCGAC CAGGTTCGCA AGTTGGCGAC CGATGTCGCA GTCCTGTACT CGACGCATTT GGTCGAGGAC GTTCGTTCGT TAGCTGACCA AATTATCATA CTTCGCAGTG GAAAGGTAGC ATTTAAGGGC ACCCTGGCTG AGGTTGAGCA GTCAGCCGAG GAAGGCGCCC CAATAGATCA GCCAGGTGCT CCAACTCGAC TAGAGCGGGG AATAAGCATG TTTATGGATG AGGTCGAATG A
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Protein sequence | MTEVVLDEVA QKFRGGFHLG PVSLNLTVGV TCLLGANGSG KTTLLRMLSG IDSPAKGTIQ IGKEGKPGEA KSIGFLPQDF TAPKNATCQD FLHYVAWSRR VSAKSRETLI QSALSRTGLS DQAEERIGNI SGGMLRRLGI AQALVHEPSF LILDEPTVGL DPGQRLRIRD QVRKLATDVA VLYSTHLVED VRSLADQIII LRSGKVAFKG TLAEVEQSAE EGAPIDQPGA PTRLERGISM FMDEVE
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