Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0583 |
Symbol | |
ID | 5703713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 663472 |
End bp | 664161 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270108 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001535502 |
Protein GI | 159036249 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGACC GACTCGCTCT GGTGACAGGC GCCAACCGGG GCACCGGACG CGCCGTCCGC AACCGGTTGA TCGCCGACGG GTTCACCGTA CGCTGCCTGA ACCGCACCTC CTGCGCCGAC CACGTCGACC CAGTCCTGGT CGACCTCCGC GACGGCGACA CCGTGCAGCG CGGCGCGCTG GCCGCGCTCG ACGGCGCCGA CCGGCTGGAC GTGCTCGTGC TCAACGCGGT CACCCGCGGC TTCGGCCGGC TGGCTGAACT GTCACCCGCA GCCTGGGACG AGGCAGTCGC CGTCAACCTG ACCTCGGTCT TCCGGCTGAC GCAGGCGGTA CTGCCGATGC TGCGCACCGC CGGTGGGCAC ATCGTGATCA TGGGCTCTCA CGCCGGCGTC CGGCCCTTCG AGGAGGGCCT GGTCTACTGT GCGACCAAGG CGGCGCTGCG GTCGGTGGCC GAGGTTCTGC TGATGGAGGA GCGGCAGCAC GGCGTACGGA CGACGCTGGT GAACCCGGGC GCGATTCGCA ACTTCCCGGA CGACTTCGCC ACGACGAAGA TGAGCGTCGA CTCGGTGGCC TCCGTGGTCT CGTGGGCTGT GGCCACCCCG CCGGATACGG TGCTCGGTGA GATCGAGCTG CGCCCCGCGC TGCTGGATCC CCCGCCGGTG ACCGGCCTGG ACCGGCTGCA GTACGTATGA
|
Protein sequence | MADRLALVTG ANRGTGRAVR NRLIADGFTV RCLNRTSCAD HVDPVLVDLR DGDTVQRGAL AALDGADRLD VLVLNAVTRG FGRLAELSPA AWDEAVAVNL TSVFRLTQAV LPMLRTAGGH IVIMGSHAGV RPFEEGLVYC ATKAALRSVA EVLLMEERQH GVRTTLVNPG AIRNFPDDFA TTKMSVDSVA SVVSWAVATP PDTVLGEIEL RPALLDPPPV TGLDRLQYV
|
| |