Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0536 |
Symbol | |
ID | 5705704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 606083 |
End bp | 608377 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270062 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001535456 |
Protein GI | 159036203 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.188836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0794142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCA CGAGCACATC GCAGTCGACC GCAGCCAACC GGATCGAGCT GGCGATCGGG GGGATGACCT GCTCCTCCTG CGCTGCCCGT ATCGAGAAGA AGCTGAACCG GATGCCCGGC GTCACCGCCA CGGTGAACTA CGCCACCGAG AAGGCGAGCG TCGCGTACCC CGACGGGGTC ACCCTGGACG ATCTGATCAC CACGGTCGAG AAGACCGGCT ACACGGCGGC CGAACCAGCC CCACCGGTAC CGGCCGGAGC AGCGCCCGCT GCGCAACCGG TGGACGAGTT GCGCGGGCTG CGCACCCGGC TGTGGGTCTC GGTCGCGCTC ACCGTGCCGG TGATACTCCT GGCGATGGTG CCGCCCTGGC AGTTCACCTA CTGGCAGTGG CTGTCGTTGA CGCTGGCCGC CCCGGTGGTG GTCTGGGCGG GCCAGCCGTT CCACCGGGCC GCCTGGACCA ACTTCCGACA CGGCGCGGCG ACCATGGACA CGCTGGTGTC ACTGGGCACC CTCGCCGCGT TCGGGTGGTC GGTGTGGGCA CTGTTTTTCG GCACGGCCGG CGTGGCCGGG ATGACCCATC CGTTCAGCTT CGACATCGCC CGCACTGACG GTGCGGGCAA TATCTACCTG GAGGCGGCGG CTGGCGTCAC CACGTTCGTC CTCGCTGGCA GGTACTTCGA GGCACGCGCG AAACGAGCCG CTGGCGCTGC CCTGCGCAGC CTGCTGGAAC TGGGAGCCAA GGACGTGGCG GTGCTGCGCG GCAGCACGGA GACCCGCATC CCGATCGACC AGCTCCGGGT GGGGGACCGG TTCGTGGTCC GCCCAGGTGA GAAGGTCGCC ACCGACGGTG TGGTGACGGA GGGTACCTCG GCGGTCGACG CCAGCATGCT CACCGGCGAA TCCGTGCCCG TCGAGGTCGA GGTCGGCGAC ACGGTCGTGG GCGCCACCGT CAACGCGGGA GGGCGGCTGG TCGTTCGGGC CACCCGGGTC GGTGGCGACA CCCAACTCGC CCAGATGGCA CGACTGGTGG AGGACGCGCA GTCCGGCAAG GCGGCCGTGC AGCGGCTGGC GGACCGGATC TCCGGGGTCT TCGTCCCCAT CGTCATCGCC CTCGCCGCCG GCACGCTTGG CTGGTGGCTG GGCAGCGGAG CGGGCCCGAC CGCCGCGTTC ACCGCCGCTG TGGCAGTGTT GATCATTGCC TGCCCGTGCG CCCTGGGCCT GGCCACCCCG ACCGCGCTGC TGGTCGGCAC CGGCCGGGGC GCTCAGCTCG GCATTCTGAT CAAGGGACCG GAGGTGCTGG AGTCCACCCG GAAGGCGGAC ACCGTCGTGC TGGACAAGAC CGGGACCATC ACCTCTGGCC AGATGACGTT GGTGGACGTG GTCGCGGCCA ACGGTGCGGA CCGGGCCGAG GTGCTCCGGC TCGCCGGGGC CCTGGAGGTT GCCTCCGAAC ATCCGATCGC CCAGGCGGTC GCCGCGGGCG CGGCCAAGGC GGGGCCCCTT CCGGCGGTGA CCGACTTCGC CAACCTCGAG GGGCTGGGCG TCAGCGGCGT GGTGGACGGC CGCGCCGTGC TGGTCGGTCG GCCCCGGCTG CTGCGGGAGC GAGACCTGGT CGTACCGGAG GAGATCGAAG CGGCCGGCAC CGCCGCGCAG GCCGCCGGAC GCACGGCGGT GCTGGTGGCC TGGGACGGTC GGGCCCGCGG GCTCCTCACC GTCGCCGACG TGGTTCGGCC GAGCAGCGCG GTCGCAGTCC GGCAACTGCG GGAACTGGGA CTGAACCCGG TGCTGCTCAC CGGCGACAAC GAAACCGTCG CCCGGACGGT CGCGGACGAG GTCGGGATCG ACCAGGTGAT CGCGGAGGTG CTACCGGCCG ACAAGGTCGC CGTGGTCCAG CGGCTCCAGC GGGAGGGCAG AGGGGTGGCG ATGATCGGTG ACGGAGTCAA TGACGCCGCG GCGCTGGCCC AGGCCGACCT CGGGCTGGCC ATGGGTACTG GTACGGATGT GGCGATCGAG GCGTCCGACC TGACCCTGGT ACGGGGCGAG CTGACCGCCG CCGTCGACGC GATCCGGCTC TCCCGGCGGA CCCTCTCGAT TATCAGGGGA AACCTGTTCT GGGCGTTCGC CTACAACGTG GCGGCGCTCC CCCTGGCCGC GGCCGGGCTG CTCAACCCGA TGATCGCCGG GGCCGCGATG GCCTTCTCCT CGGTCTTCGT GGTCGCCAAC AGCCTCCGGC TACGGGGCTT CCGCCCGGTG GCCCAGGTCG CGGTTGAACC CCGGTCTCCC GGGTACCCCC GGTAA
|
Protein sequence | MTTTSTSQST AANRIELAIG GMTCSSCAAR IEKKLNRMPG VTATVNYATE KASVAYPDGV TLDDLITTVE KTGYTAAEPA PPVPAGAAPA AQPVDELRGL RTRLWVSVAL TVPVILLAMV PPWQFTYWQW LSLTLAAPVV VWAGQPFHRA AWTNFRHGAA TMDTLVSLGT LAAFGWSVWA LFFGTAGVAG MTHPFSFDIA RTDGAGNIYL EAAAGVTTFV LAGRYFEARA KRAAGAALRS LLELGAKDVA VLRGSTETRI PIDQLRVGDR FVVRPGEKVA TDGVVTEGTS AVDASMLTGE SVPVEVEVGD TVVGATVNAG GRLVVRATRV GGDTQLAQMA RLVEDAQSGK AAVQRLADRI SGVFVPIVIA LAAGTLGWWL GSGAGPTAAF TAAVAVLIIA CPCALGLATP TALLVGTGRG AQLGILIKGP EVLESTRKAD TVVLDKTGTI TSGQMTLVDV VAANGADRAE VLRLAGALEV ASEHPIAQAV AAGAAKAGPL PAVTDFANLE GLGVSGVVDG RAVLVGRPRL LRERDLVVPE EIEAAGTAAQ AAGRTAVLVA WDGRARGLLT VADVVRPSSA VAVRQLRELG LNPVLLTGDN ETVARTVADE VGIDQVIAEV LPADKVAVVQ RLQREGRGVA MIGDGVNDAA ALAQADLGLA MGTGTDVAIE ASDLTLVRGE LTAAVDAIRL SRRTLSIIRG NLFWAFAYNV AALPLAAAGL LNPMIAGAAM AFSSVFVVAN SLRLRGFRPV AQVAVEPRSP GYPR
|
| |