Gene Sare_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0522 
Symbol 
ID5707124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp592814 
End bp595003 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content70% 
IMG OID641270048 
ProductCDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 
Protein accessionYP_001535442 
Protein GI159036189 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.010649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTGA TCAGCTTCGT GGTCCCGGCC TACCGGGTGC AGGGCTACCT GCGTGAATGC 
CTGGACTCCA TTCTCGGGCA GCCGGTGGCC GAGATCGAGG TGATCGGTGT CGACGACTGC
TCGCCGGACG GCAGCGGTGA GATCCTGACC GAGTACGCGG CCCGCGACCA GCGGGTACGG
GTGCTCCGGC TACCGGCGAA CCGAGGACTG GGTCCGGCCC GGAACGCGGG CCTGGACCAG
GCCACCGGCG ACTACGTGTG GTTTGTCGAC GGCGATGACT GGCTGGTGTC GGAGTGCCTC
ACCGAAGTGG CCGGGCGGCT ACGCGAGACC CGCCCGGACG TCCTCGTCGT GGACCACCTG
CGGGCCTGGT GGGTCGGTAA CGCCACACCG AGCGGAATGT GCGAGGTCTT CCCGGATCCG
CCCGGATCGG AGACGTTCCG GCTGCGCGAC CGGCCGGAAA CGATCCGCCT GCTGCACACC
GTGTGGAACA AGGTGCTGCG CCGCGAGTTC CTGCTCGAGC ACGGGCTGCG CTTCGCCCCA
GGCTGGTACG AGGACGTCTC CTTCAGCTAC CCCGTGCTCC TGCGCGCCCA GCGGATCGGG
GTACTGGATC GGGCCTGCGT GAACTATCGG CAGCGCCGCG CCGGTGCCAT CACCCGGACT
TCGGGGGACC GGCACTTCGA GGTTTTCGCA CAGTGGCGCC GGGTGTTTCG CTTCCTGGAC
GAGGGGGAGC CCGTCGGGGA CGATCTCCGT CGGCTGATCT TCGAACGGAT GATCTGGCAC
TATCTGACGG TGCTCGGCAA CGGGGAACGG ATCCCCCGGG ACCTGCGGCC CGCCTTCTTT
GGCCGGATCA CCGCGGACTA CGCCCGGTGG GTTCCGGCGC AGGGTCTCCC GCCCCCCGAA
GGAATCGAAG GGCTCAAGCA CCGGCTGGTC GCCGCCGGCC GGTGGCGTAC GTTCAGCGCG
TTGCGCGGTG CGGTCCGGAT GCGGGACGCC GCCGCCCGAC GACCGGCACG GCGGGTGTTG
CGGCGTGCCG TGCCGGCCAT CCGGCGGGCC CGGGACGTCG GGCTGCGCGA GTTGTACCGG
GCCGAGTTGC TGCGGCCGGT TGACCCGCAG TTGGCGGTGT ACGCCGCCTA CTGGTACCGC
GGCTACGCCT GCAACCCGGC GGCCATCTAC GAGGCCGCCC GTCGGCTGGC CCCGCACGTT
CGCGGGGTCT GGATCGTCCA GCGGGACCGG GTGGACACGG TGCCGGCAGG TGTGGACTAT
GTGGTCGCCG GCACCCTCGC CGGGTACCGG GCCCTGGCGC AGGCGCGCTG GTTGGTGAAC
AACGTCAACT TCCCGAACTC TGTCCGCAAA CGCCCTGGTA CCGTGCACGT CCAGACCCAC
CACGGCACGC CGGTCAAGGT GATGGGTCTG GACCAACAGT TCCACCCGGC CGGGGCGGAC
ATGGACTTCG TCGGGCTGCT GCGTCGGGTA GACCGGTGGG ACTACAGCAT CACGTCGAAC
AGCTTCTCCA CCCAGATGTG GGAGCGGGCC TACCCGGCCG GGTACACCAC GCTGGAGATG
GGGTATCCGC GCAACGACCG GTTGGTGAAC GCGACCGCTG GGGACGTGCT GCGGATTCGG
GCCGAGCTTG GCCTGGGGGT TGACGAGCAG GTGGTCCTGT ACGTGCCGAC GCACCGTGAG
CACCTGCCGG GGTACCGGCC GCCGTTCGAC CCGGACCGGT TCCTCGCCGT GCTGGGGCCC
GCCGGTCAGC TGCTCATGCG CAGCCACTAC CTCTACGATC GGGATCGCCG GAGGTCGCGC
CCGGCCAGTC GGGAACGGCT GCGCGACGTG AGCGGCTACC ACCGGGTGGA GGACCTCTAT
CTCGCCGCCG ACGTTCTGGT CACCGACTAT TCGTCGGCGA TGTTCGACTA CGCCATCCTG
GATCGGCCGA TCGTCGTGTA CGCGCCGGAC TGGCCGGCGT ACCGCCTGAC CCGCGGCGTC
TACCTCGATG TGGTGGCGGA GCCGCCGGGG GCGGTGGCGA CGGACTTCGT GGGCCTGCTC
GAACTCTTTC GGTCCGGGGC GGTGCGTGAT CGGCGGGCGG ACGAGGCTCG GCGCCGGTTC
CGCGACCGGT TCTGCCGGCT CGACGACGGC CACGCCGCCG AGCGGGTGGT CCAGCGGGTC
TTCCTCGACG GTGTGGCCAG AGCGGGTTAG
 
Protein sequence
MALISFVVPA YRVQGYLREC LDSILGQPVA EIEVIGVDDC SPDGSGEILT EYAARDQRVR 
VLRLPANRGL GPARNAGLDQ ATGDYVWFVD GDDWLVSECL TEVAGRLRET RPDVLVVDHL
RAWWVGNATP SGMCEVFPDP PGSETFRLRD RPETIRLLHT VWNKVLRREF LLEHGLRFAP
GWYEDVSFSY PVLLRAQRIG VLDRACVNYR QRRAGAITRT SGDRHFEVFA QWRRVFRFLD
EGEPVGDDLR RLIFERMIWH YLTVLGNGER IPRDLRPAFF GRITADYARW VPAQGLPPPE
GIEGLKHRLV AAGRWRTFSA LRGAVRMRDA AARRPARRVL RRAVPAIRRA RDVGLRELYR
AELLRPVDPQ LAVYAAYWYR GYACNPAAIY EAARRLAPHV RGVWIVQRDR VDTVPAGVDY
VVAGTLAGYR ALAQARWLVN NVNFPNSVRK RPGTVHVQTH HGTPVKVMGL DQQFHPAGAD
MDFVGLLRRV DRWDYSITSN SFSTQMWERA YPAGYTTLEM GYPRNDRLVN ATAGDVLRIR
AELGLGVDEQ VVLYVPTHRE HLPGYRPPFD PDRFLAVLGP AGQLLMRSHY LYDRDRRRSR
PASRERLRDV SGYHRVEDLY LAADVLVTDY SSAMFDYAIL DRPIVVYAPD WPAYRLTRGV
YLDVVAEPPG AVATDFVGLL ELFRSGAVRD RRADEARRRF RDRFCRLDDG HAAERVVQRV
FLDGVARAG