Gene Sare_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0518 
Symbol 
ID5707120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp587811 
End bp589208 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content70% 
IMG OID641270044 
ProductL-serine dehydratase 1 
Protein accessionYP_001535438 
Protein GI159036185 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.166535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000152397 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCAGCA TCTTCGACCT TTTCAGTGTC GGTATCGGTC CGTCCAGCTC GCACACCGTC 
GGGCCGATGC GCGCCGCCCG GACGTTCGTC ACCGGGCTCA AGGCCGACGG GCTGCTCACC
GAGACGGTAC GGATCCGTGC CGAACTGTTC GGCTCGCTGG GTGCGACCGG TCACGGTCAC
GGCAGCGACC GGGCGGTCCT GCTCGGGCTT GCCGGTGAGA CACCGGAAAC GGTCGACACC
GACGCCGCCG AGGCGTGGAT CGGTCTGGTC CGTGCCGAGC AGCGGATCGC GCTGCTCGCC
GCACACGAGA TCGACTTCGA CCCGGACCGG GACCTCGTGC TGCACCGCCG CCGGTCGCTG
CCGTACCACC CGAACGGGAT GACCTTCGCC GCCTACGACC TGACCGGCGG CGAGATCCGA
GCCCGCACGT ACTACTCGGT CGGTGGGGGT TTCGTCGTCG ACGAGGCGGC CGCGGGAGCG
GGCCGGATCA GCTCGGACAC CACTGCGGTA CGCCACCCCT TCTCGACCGG CGCGGAGCTG
CTGGCGGTGA CTCGGGAGAC CGGGCTGTCG ATCAGCGAGG TGATGCTGGC CAACGAGCTG
TCCTGGCGGA GCGAGCGTGA GGTACGCGCC GGCCTGCTGG AGATCTGGCG GGTGATGCGT
GAGTGCGTGG CGCGGGGCTG CGAACGCGAG GGCGTCCTCC CGGGTGGGCT GCGGGTGCGG
CGGCGGGCAG CCGAGCTGTA CCGCGGCCTG ATGGTGGACG CGGATCCGAT GCGGTCGGCG
GCGGGTTTGG GGATGGTGGA TCCGCTGCGT GCGATGGACT GGGTGACCCT GTTCGCCCTC
GCGGTCAACG AGGAGAACGC GGGTGGTGGC CGGGTGGTGA CCGCACCGAC CAATGGTGCG
GCCGGCATCA TCCCGGCTGT ACTGCACTAC TACGACCGGT TCGGGCCGGG TGCCACCCCC
GACGGTGTGG TGCGGTTCCT GCTCGCGGCC GGCGCGATCG GTGTGCTGTT CAAGGAGAAC
GCCTCGATCT CCGGCGCTGA GGTGGGTTGC CAGGGCGAGG TGGGCTCGGC CTGTTCGATG
GCGGCAGCCG GGCTGGCCGA GGCGCTGGGT GGCAGCCCGG AGCAGGTGGA GAACGCCGCC
GAGATCGGCA TGGAACACAA CCTGGGACTG ACCTGCGACC CGGTCGGCGG CCTCGTGCAG
ATCCCCTGCA TCGAACGGAA CGCGGTGGCT AGCATCAAGG CGATCACGGC GGCCCGGCTC
GCACTGCGGG GTGACGGCGT GCACCATGTC TCGCTCGACA AGGTCATCAA GACCATGCGC
GAGACCGGGG CGGACATGAA GGTCAAATAC AAGGAGACGG CACGGGGAGG TCTCGCCGTC
AACGTGATCG AGTGCTGA
 
Protein sequence
MISIFDLFSV GIGPSSSHTV GPMRAARTFV TGLKADGLLT ETVRIRAELF GSLGATGHGH 
GSDRAVLLGL AGETPETVDT DAAEAWIGLV RAEQRIALLA AHEIDFDPDR DLVLHRRRSL
PYHPNGMTFA AYDLTGGEIR ARTYYSVGGG FVVDEAAAGA GRISSDTTAV RHPFSTGAEL
LAVTRETGLS ISEVMLANEL SWRSEREVRA GLLEIWRVMR ECVARGCERE GVLPGGLRVR
RRAAELYRGL MVDADPMRSA AGLGMVDPLR AMDWVTLFAL AVNEENAGGG RVVTAPTNGA
AGIIPAVLHY YDRFGPGATP DGVVRFLLAA GAIGVLFKEN ASISGAEVGC QGEVGSACSM
AAAGLAEALG GSPEQVENAA EIGMEHNLGL TCDPVGGLVQ IPCIERNAVA SIKAITAARL
ALRGDGVHHV SLDKVIKTMR ETGADMKVKY KETARGGLAV NVIEC