Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0512 |
Symbol | |
ID | 5705530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 582413 |
End bp | 583078 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270038 |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_001535432 |
Protein GI | 159036179 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.32246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00235645 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGATGTGA CGGGCGACAC AGTGCCGCCG GCAAACCTGC GTAACGAGTA CGCCGCGGAC CTGGGCCTGA CCGAGTCGAA CCTGGCCGGT GACTGGTACA CCCAGTTCGA CCGCTGGTTC ACCGAAGTGG TGGCCGCTGG CCTGCCCGAG CCGAACGCGA TGGTGCTCGG CACCGCGGAC AGGGCCGGTC GGCCGAGCGC CCGCACGGTG CTGCTGAAGG GGTACGACCC AGACGGCTTC GTCCTGTTCA CCAACTACGG GTCACACAAG GGCACCGAGC TGGCCGCCAA CCCGTACGCC AGCCTGGTCT TCCCCTGGTT CATGCTGCAG CGCCAGGTCG TGGTGACCGG TCGGGTGGAC CGGCTGGACC GGGCCGAGAC CGAGGCGTAC TTCGCCAGCC GCCCGCGCGG CTCCCAGCTC GGGGCATGGG CGAGTGAACA GTCGCGGGTG CTTCCGAACC GGTCGGCGCT GGACGACGCG TACCGGGCCA TGGCGGAGCG CTACGCCGAC GGTGTGCCGA TCCCCGCCCC GCCGAACTGG GGCGGCTTTC GGCTGCGTCC CGACGGGGTC GAGTTCTGGC AGGGTCAGGC GAGTCGGCTG CACGACCGGT TGCGGTTCCG TTCCACTGAC GGGGGCGACT GGGTCGTCGA GCGGCTCGCG CCGTGA
|
Protein sequence | MDVTGDTVPP ANLRNEYAAD LGLTESNLAG DWYTQFDRWF TEVVAAGLPE PNAMVLGTAD RAGRPSARTV LLKGYDPDGF VLFTNYGSHK GTELAANPYA SLVFPWFMLQ RQVVVTGRVD RLDRAETEAY FASRPRGSQL GAWASEQSRV LPNRSALDDA YRAMAERYAD GVPIPAPPNW GGFRLRPDGV EFWQGQASRL HDRLRFRSTD GGDWVVERLA P
|
| |