Gene Sare_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0512 
Symbol 
ID5705530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp582413 
End bp583078 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID641270038 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001535432 
Protein GI159036179 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.32246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00235645 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATGTGA CGGGCGACAC AGTGCCGCCG GCAAACCTGC GTAACGAGTA CGCCGCGGAC 
CTGGGCCTGA CCGAGTCGAA CCTGGCCGGT GACTGGTACA CCCAGTTCGA CCGCTGGTTC
ACCGAAGTGG TGGCCGCTGG CCTGCCCGAG CCGAACGCGA TGGTGCTCGG CACCGCGGAC
AGGGCCGGTC GGCCGAGCGC CCGCACGGTG CTGCTGAAGG GGTACGACCC AGACGGCTTC
GTCCTGTTCA CCAACTACGG GTCACACAAG GGCACCGAGC TGGCCGCCAA CCCGTACGCC
AGCCTGGTCT TCCCCTGGTT CATGCTGCAG CGCCAGGTCG TGGTGACCGG TCGGGTGGAC
CGGCTGGACC GGGCCGAGAC CGAGGCGTAC TTCGCCAGCC GCCCGCGCGG CTCCCAGCTC
GGGGCATGGG CGAGTGAACA GTCGCGGGTG CTTCCGAACC GGTCGGCGCT GGACGACGCG
TACCGGGCCA TGGCGGAGCG CTACGCCGAC GGTGTGCCGA TCCCCGCCCC GCCGAACTGG
GGCGGCTTTC GGCTGCGTCC CGACGGGGTC GAGTTCTGGC AGGGTCAGGC GAGTCGGCTG
CACGACCGGT TGCGGTTCCG TTCCACTGAC GGGGGCGACT GGGTCGTCGA GCGGCTCGCG
CCGTGA
 
Protein sequence
MDVTGDTVPP ANLRNEYAAD LGLTESNLAG DWYTQFDRWF TEVVAAGLPE PNAMVLGTAD 
RAGRPSARTV LLKGYDPDGF VLFTNYGSHK GTELAANPYA SLVFPWFMLQ RQVVVTGRVD
RLDRAETEAY FASRPRGSQL GAWASEQSRV LPNRSALDDA YRAMAERYAD GVPIPAPPNW
GGFRLRPDGV EFWQGQASRL HDRLRFRSTD GGDWVVERLA P