Gene Sare_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0500 
Symbol 
ID5703305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand- 
Start bp570345 
End bp570995 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content75% 
IMG OID641270026 
Producthypothetical protein 
Protein accessionYP_001535420 
Protein GI159036167 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR03664] futalosine nucleosidase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0861636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.00863612 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGACG TACTGGTGGT CACCGCGGTT CCCGCGGAGG CCGAGGCGGT CCGCGCGGGC 
CGGGGACCAA CGGTCACGGT GGCACCGGTC GGAGTCGGGC CGGCGGTGGC TGGCGCCGCC 
ACCGCCCGAC TGCTGGCACT GGCGGAGGCC GCAGGCCACC CCTACCGTGT GGTCGTCAGC 
GCGGGTGTGG CCGGCGGATT CCCGGGTCAG GTACAGGTCG GCGGGACCGT CGTCGGTACC 
AGTGCGATCG CGGCCGACCT GGGTGCCGAC TCCCCGACCG GCTTCATCCC CGTGGACCAG 
CTCGGGATGC CGGCGGAGCT ACTGGGCGGC GGCACCACGA TCATCGCGGA TCCGACCCTG 
GTCGCCGCGC TCCGGGCCGC ACTGCCGTCG GCCGTGGCAG GGCCGGTGCT GACCGTCGGC 
ACGGTCACCG GAACAGTCGC CGGGACCGAC GCGCTCCTCC ACCGGCACCC CGACGCAGTG 
GCCGAGGCCA TGGAGGGGCA CGGGGTGGCT GTCGCCGCCG CGCACGCCGG CCTACCCTTC 
GTCGAGCTAC GGACCATCTC CAACCCGGTC GGGCCGCGCG ACCGCAACGC CTGGCGCCTG 
CGCGAGGCGC TCACCGCCCT CACCCAGGCC GCCGCGGCCC TCCCTTTCTG A
 
Protein sequence
MTDVLVVTAV PAEAEAVRAG RGPTVTVAPV GVGPAVAGAA TARLLALAEA AGHPYRVVVS 
AGVAGGFPGQ VQVGGTVVGT SAIAADLGAD SPTGFIPVDQ LGMPAELLGG GTTIIADPTL 
VAALRAALPS AVAGPVLTVG TVTGTVAGTD ALLHRHPDAV AEAMEGHGVA VAAAHAGLPF 
VELRTISNPV GPRDRNAWRL REALTALTQA AAALPF