| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0490 |
|---|
| Symbol | |
|---|
| ID | 5704837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 558701 |
|---|
| End bp | 559852 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641270016 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001535410 |
|---|
| Protein GI | 159036157 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.783737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.570174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGAGC TGGACGGACG GCTGACCGCG CTGCGCACGC GGGCCGCGGA GTGGGCTGGC
GACCTTGCCG CGGTCGGTGC GGACCTCGAC CACGACCCGG ACGCCGTGCA CCGTGTGCTC
GACACGCCGG TGATGCGCTA CCTCGCCACC GCCCGGTACG CCCCGAGCGC CGACACACCG
TCGCTGACCT CTGGCGGGCA CCGGTTCTCT TTGGACAGCG TGCTCGAACA GGTAGTGTTC
TTCGAGGAAC TGGCCGTGGT CGATGTTGGC GCCGTCCTCG CCGCTCCCGG AGCGCCGATG
GCCGGCCCGC TGGTGGACCT GCTGGGGGAC GAGGAGCAAC GTGAGTGGTT CTTCGCACAA
CTGCGCAGTG CGCCGACGTG GGTCTTCTTC GCGCTCACCG AGCCGGCGCA CGGCTCCGAC
GCCGCTGGCC TGACGACCCG GTTGGACCCG GACGGCGACG GCTTCCGGCT GACCGGCACC
AAACGCTACG TCGGCAACGC GCCACGCGCC CGGCTCGGTG TGGTGTTCGC GCGGGTCCGA
CCCGGGCCGC TGGGCCTGCG GGCGGTGCTG GTCACCGCCC CGGCGCCAGG GTTGACGATC
GAGGCGCTGC CCACCATCGG GCTGCGTGGT GCGGCGCTCG GTGCGATCAC CATGTCGTCG
GTCGCGATCG CCGACGACCG GGTCCTCGGC CGCCACCTGC CCGCCACCCG GCGTGGCGTG
CTCAGCTGGG TGCACGTGTT CAACCGCATC CGTCCCCGCG TCGCCGCCAT GGGGATCGGC
ATCGCCCGCG CCGCCTTCGA GTACGTGCGC GTACACCGGC GGACCCTGCG TCCGGCCGCA
CGCGACCGGC TCGACGCGCT GTGCCGGCGC GTCGAAGCGG TCCGACAACT CAACCTGGCG
GCCGCCAGGG CGGTGGATGC CGACCCGGCG GACGGCCGGC TGGCCTCCGC CGCCAAGGCC
CGCGCCGCCC GGCTGGCCGA GGACGTCACG GTGGCCTGCC TGGAGTACTT CGGCCCCGGC
GCACGCCTTG ACCATCCGCT GCTCGGCAAG CTCGCCCGCG ACGCGCGTGG CGTGGAGTTC
ATGGAGGGCG CATCGAACGT GCAGAAGCTG ATCGTTTCCC AAGACCTGAT CCGGAGGGGT
CGTCCGACAT GA
|
|---|
| Protein sequence | MYELDGRLTA LRTRAAEWAG DLAAVGADLD HDPDAVHRVL DTPVMRYLAT ARYAPSADTP
SLTSGGHRFS LDSVLEQVVF FEELAVVDVG AVLAAPGAPM AGPLVDLLGD EEQREWFFAQ
LRSAPTWVFF ALTEPAHGSD AAGLTTRLDP DGDGFRLTGT KRYVGNAPRA RLGVVFARVR
PGPLGLRAVL VTAPAPGLTI EALPTIGLRG AALGAITMSS VAIADDRVLG RHLPATRRGV
LSWVHVFNRI RPRVAAMGIG IARAAFEYVR VHRRTLRPAA RDRLDALCRR VEAVRQLNLA
AARAVDADPA DGRLASAAKA RAARLAEDVT VACLEYFGPG ARLDHPLLGK LARDARGVEF
MEGASNVQKL IVSQDLIRRG RPT
|
|---|
| |