Gene Sare_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0463 
Symbol 
ID5703642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp532159 
End bp532866 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content74% 
IMG OID641269988 
ProductNADH dehydrogenase (ubiquinone) 30 kDa subunit 
Protein accessionYP_001535383 
Protein GI159036130 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00204807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCTGG ACGAGGTCGG CCAGCGGATG GCCGCGCTGC TCGCACCGGT CGAGGTCACC 
ACCTCGGTCT CCGGCGGTCA GGCGCACGCC CGTGCCACCG TCGACGTGCC CTCGGCGAGC
TGGCCCGACG CGCTCCGCGC GGCCCGCGAC GACAGCGACC TGGCCTGTGA CTACTTCGAC
TGGCTCTCCG CGGTCGACGA GTTGGAGGCC GGGTTCGATG TGGTGGTTCA CCTGTGGTCC
ACCGCGCACC GGCATGGGCT GCTGCTGCGT ACCCGGGTTC CGCGCACGGC ACCGAGGGTC
GCCTCGGTGG TCACCGTCTA TCCGGGCGCG GCGTGGCACG AGCGCGAGAC ACACGAGATG
TTCGGCATCG ACTTCGTCGA TCACGCCGGC CTCAAGCCGC TGCTGCTGCC CCCGGAGTTC
GAGGGCCATC CGCTGCGTAA GGACTTCGTC CTCGCCTCCC GGGTGGCCAA ACCCTGGCCG
GGGGCGAAGG AGCCGGGCGA GTCCAGGGCC GGCGGTGGTC GCCGGCCGAT CCGTCCGCCC
GGCGTGCCCG CGCCGGGGGA GTGGGGCGCG GTGCCCACTC CCGCTGGGGC GGCCGGTGTG
GGTGAGGGCC CGCGCGGTGG GACACCGGCC CGGCCGAACC GGGACCGGAG CGGCGGTCGG
GGTTCGGGAG TGACCGGGCA GCCCAGCGAG GGCGGGGGAA CGGTCTGA
 
Protein sequence
MNLDEVGQRM AALLAPVEVT TSVSGGQAHA RATVDVPSAS WPDALRAARD DSDLACDYFD 
WLSAVDELEA GFDVVVHLWS TAHRHGLLLR TRVPRTAPRV ASVVTVYPGA AWHERETHEM
FGIDFVDHAG LKPLLLPPEF EGHPLRKDFV LASRVAKPWP GAKEPGESRA GGGRRPIRPP
GVPAPGEWGA VPTPAGAAGV GEGPRGGTPA RPNRDRSGGR GSGVTGQPSE GGGTV