Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0463 |
Symbol | |
ID | 5703642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 532159 |
End bp | 532866 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641269988 |
Product | NADH dehydrogenase (ubiquinone) 30 kDa subunit |
Protein accession | YP_001535383 |
Protein GI | 159036130 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00204807 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCTGG ACGAGGTCGG CCAGCGGATG GCCGCGCTGC TCGCACCGGT CGAGGTCACC ACCTCGGTCT CCGGCGGTCA GGCGCACGCC CGTGCCACCG TCGACGTGCC CTCGGCGAGC TGGCCCGACG CGCTCCGCGC GGCCCGCGAC GACAGCGACC TGGCCTGTGA CTACTTCGAC TGGCTCTCCG CGGTCGACGA GTTGGAGGCC GGGTTCGATG TGGTGGTTCA CCTGTGGTCC ACCGCGCACC GGCATGGGCT GCTGCTGCGT ACCCGGGTTC CGCGCACGGC ACCGAGGGTC GCCTCGGTGG TCACCGTCTA TCCGGGCGCG GCGTGGCACG AGCGCGAGAC ACACGAGATG TTCGGCATCG ACTTCGTCGA TCACGCCGGC CTCAAGCCGC TGCTGCTGCC CCCGGAGTTC GAGGGCCATC CGCTGCGTAA GGACTTCGTC CTCGCCTCCC GGGTGGCCAA ACCCTGGCCG GGGGCGAAGG AGCCGGGCGA GTCCAGGGCC GGCGGTGGTC GCCGGCCGAT CCGTCCGCCC GGCGTGCCCG CGCCGGGGGA GTGGGGCGCG GTGCCCACTC CCGCTGGGGC GGCCGGTGTG GGTGAGGGCC CGCGCGGTGG GACACCGGCC CGGCCGAACC GGGACCGGAG CGGCGGTCGG GGTTCGGGAG TGACCGGGCA GCCCAGCGAG GGCGGGGGAA CGGTCTGA
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Protein sequence | MNLDEVGQRM AALLAPVEVT TSVSGGQAHA RATVDVPSAS WPDALRAARD DSDLACDYFD WLSAVDELEA GFDVVVHLWS TAHRHGLLLR TRVPRTAPRV ASVVTVYPGA AWHERETHEM FGIDFVDHAG LKPLLLPPEF EGHPLRKDFV LASRVAKPWP GAKEPGESRA GGGRRPIRPP GVPAPGEWGA VPTPAGAAGV GEGPRGGTPA RPNRDRSGGR GSGVTGQPSE GGGTV
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