| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0461 |
|---|
| Symbol | |
|---|
| ID | 5705458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 530270 |
|---|
| End bp | 530836 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641269986 |
|---|
| Product | NADH-quinone oxidoreductase, B subunit |
|---|
| Protein accession | YP_001535381 |
|---|
| Protein GI | 159036128 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000131462 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGTGC CGGCCGTGCT GGGTGAGCCG ATCCGGTTCG TGTTGAACTG GGGCCGCCGC
TACTCGCTCT GGGTCTTCAA CTTCGGCCTT GCCTGCTGTG CCATCGAGTT CATCGCCACC
AGCATGAGCC GACACGACTT CATGCGCCTC GGGGTGATCC CGTTCGCGCA CGGACCCCGC
CAGGCCGACC TCATGGTGGT GTCCGGCACG GTCACCGACA AGATGGCCCC CGCGATCAAG
CGGCTGTACG ACCAGATGCC CGAGCCGAAG TACGTGATTT CCTTTGGCGC CTGCTCGAAC
TGCGGCGGTC CGTACTGGGA CTCGTATTCG GTTACCAAGG GCGTCGACCA GCTCATCCCG
GTCGACGTCT ACGTTCCGGG CTGCCCGCCC CGGCCGGAGG CGCTGCTGCA CGGCATCCTC
CGCCTGCAGG AGAAAATCGC CGCGGAGGGG GCCGGTGTCG GTGGAGTGTC CCGCCCGGAC
GCCCTCGCCT CGCCGACCGG TGGGGCCGCC CCCCGCTCCG CCGACTCGCT GACCGCCCCG
CTGGTCCGCC CGCCCACCCC GTCCTGA
|
|---|
| Protein sequence | MQVPAVLGEP IRFVLNWGRR YSLWVFNFGL ACCAIEFIAT SMSRHDFMRL GVIPFAHGPR
QADLMVVSGT VTDKMAPAIK RLYDQMPEPK YVISFGACSN CGGPYWDSYS VTKGVDQLIP
VDVYVPGCPP RPEALLHGIL RLQEKIAAEG AGVGGVSRPD ALASPTGGAA PRSADSLTAP
LVRPPTPS
|
|---|
| |